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The map label for this gene is ysgA [H]

Identifier: 148823953

GI number: 148823953

Start: 3086591

End: 3087328

Strand: Direct

Name: ysgA [H]

Synonym: TBFG_12778

Alternate gene names: 148823953

Gene position: 3086591-3087328 (Clockwise)

Preceding gene: 148823939

Following gene: 148823963

Centisome position: 69.76

GC content: 66.4

Gene sequence:

>738_bases
ATGCCGAAAACCACCGACACCGCCGCTACTCCTGACGGCACCTGCGCCGTGCGTCTGTTCACTCCCGATGGTCCGGGCCG
CTGGCCCGGTGTGGTGATGTTTCCTGACGCCGGCGGCGTTCGGGACACCTTCGACCGGATGGCCGCCAAGCTAGCCGGAT
TCGGTTACGTGGTTCTGCTTCCCGACGTGTACTACCGCGAAGGCGACTGGGCTCCATTCGATATGAAGACCGCGTTCGGC
GATCCGCAAGAACGCGCACGGATCATGTTTATGATTGGCACCCTAACGCCCGACCGGGTAACCCGTGATGCCGATGCGCT
TCTCAACTACCTGGCCAGCCGCCCGGAGGTGATCGGGGACCGCTTCGGTGTCTGCGGCTACTGCATGGGCGGGCGAATGT
CGGTGGTGGTGGCCGGCCGCCTGCCGGATCGTGTCGCCGCCGCGGCAGCTTTCCACCCCGGCGGTTTGGTGGCCAACAGC
CCGGACAGCCCGCACTTGCTGGCCGACCGGATCAGCGCCACCGTCTACATCGGCGGCGCGGAGAACGACCCGTCGTTCAC
CGCCGACCACGCCGAGAAACTCGACAAAGCGTTCAGCGCGGCCGGCGTGCCGCACCGCATCGAGTGCTACCCGGCCGCCC
ACGGGTTCGCGGTCCCGGACAATCCGTCTTATGACGCCGCAGCCGACGAACGCCATTGGGCAGCAATGACAGAGACCTTC
GGCGCAGCGCTCAACTAG

Upstream 100 bases:

>100_bases
CCAAACAAACCCAGCGGGCGATCGCAAGCGCGGCGAAGCCGGGCACAGCGAGTCGACGGGAATACACCCAGATCCGCGCC
ACAGGAGTACAACGGAGGCC

Downstream 100 bases:

>100_bases
CCCCGCCAAGCAGACGCAGAATCGCATTAATCGCGCCCGGTTTGTGCGATTCTGCGTCTGCTTGGCAGCACCTCAGGCGC
CGCGACGTCGATCCCGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPKTTDTAATPDGTCAVRLFTPDGPGRWPGVVMFPDAGGVRDTFDRMAAKLAGFGYVVLLPDVYYREGDWAPFDMKTAFG
DPQERARIMFMIGTLTPDRVTRDADALLNYLASRPEVIGDRFGVCGYCMGGRMSVVVAGRLPDRVAAAAAFHPGGLVANS
PDSPHLLADRISATVYIGGAENDPSFTADHAEKLDKAFSAAGVPHRIECYPAAHGFAVPDNPSYDAAADERHWAAMTETF
GAALN

Sequences:

>Translated_245_residues
MPKTTDTAATPDGTCAVRLFTPDGPGRWPGVVMFPDAGGVRDTFDRMAAKLAGFGYVVLLPDVYYREGDWAPFDMKTAFG
DPQERARIMFMIGTLTPDRVTRDADALLNYLASRPEVIGDRFGVCGYCMGGRMSVVVAGRLPDRVAAAAAFHPGGLVANS
PDSPHLLADRISATVYIGGAENDPSFTADHAEKLDKAFSAAGVPHRIECYPAAHGFAVPDNPSYDAAADERHWAAMTETF
GAALN
>Mature_244_residues
PKTTDTAATPDGTCAVRLFTPDGPGRWPGVVMFPDAGGVRDTFDRMAAKLAGFGYVVLLPDVYYREGDWAPFDMKTAFGD
PQERARIMFMIGTLTPDRVTRDADALLNYLASRPEVIGDRFGVCGYCMGGRMSVVVAGRLPDRVAAAAAFHPGGLVANSP
DSPHLLADRISATVYIGGAENDPSFTADHAEKLDKAFSAAGVPHRIECYPAAHGFAVPDNPSYDAAADERHWAAMTETFG
AALN

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=227, Percent_Identity=31.2775330396476, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 26160; Mature: 26028

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTTDTAATPDGTCAVRLFTPDGPGRWPGVVMFPDAGGVRDTFDRMAAKLAGFGYVVLL
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
PDVYYREGDWAPFDMKTAFGDPQERARIMFMIGTLTPDRVTRDADALLNYLASRPEVIGD
CCEEEECCCCCCCCCHHHCCCHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHC
RFGVCGYCMGGRMSVVVAGRLPDRVAAAAAFHPGGLVANSPDSPHLLADRISATVYIGGA
CCCEEEEECCCEEEEEEECCCCHHHHHHHEECCCCEEECCCCCCCHHHHCCEEEEEEECC
ENDPSFTADHAEKLDKAFSAAGVPHRIECYPAAHGFAVPDNPSYDAAADERHWAAMTETF
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GAALN
HHCCC
>Mature Secondary Structure 
PKTTDTAATPDGTCAVRLFTPDGPGRWPGVVMFPDAGGVRDTFDRMAAKLAGFGYVVLL
CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
PDVYYREGDWAPFDMKTAFGDPQERARIMFMIGTLTPDRVTRDADALLNYLASRPEVIGD
CCEEEECCCCCCCCCHHHCCCHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHC
RFGVCGYCMGGRMSVVVAGRLPDRVAAAAAFHPGGLVANSPDSPHLLADRISATVYIGGA
CCCEEEEECCCEEEEEEECCCCHHHHHHHEECCCCEEECCCCCCCHHHHCCEEEEEEECC
ENDPSFTADHAEKLDKAFSAAGVPHRIECYPAAHGFAVPDNPSYDAAADERHWAAMTETF
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GAALN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]