Click here to switch to the map view.

The map label for this gene is 148823947

Identifier: 148823947

GI number: 148823947

Start: 3082830

End: 3083225

Strand: Reverse

Name: 148823947

Synonym: TBFG_12772

Alternate gene names: NA

Gene position: 3083225-3082830 (Counterclockwise)

Preceding gene: 148823948

Following gene: 148823946

Centisome position: 69.69

GC content: 66.92

Gene sequence:

>396_bases
GTGATCGTCGATACGTCGGCCATCGTCGCCATCGTGAGCGGGGAATCGGGCGCGCAGGTGCTCAAGGAGGCGCTGGAGCG
GTCACCGAACTCCCGAATGTCCGCGCCCAACTACGTCGAACTGTGCGCGATCATGCAGCGGCGGGACCGGCCGGAGATCT
CTCGATTGGTGGACCGTTTGCTGGACGACTACGGAATCCAGGTCGAAGCCGTCGACGCCGACCAAGCCCGCGTGGCCGCG
CAGGCGTATCGCGACTACGGCCGCGGCAGCGGCCATCCGGCCCGTCTCAACCTCGGCGACACCTACAGCTACGCCCTGGC
CCAGGTCACCGGGGAGCCGCTGCTGTTTCGTGGCGATGACTTCACGCATACCGATATCCGGCCCGCGTGCACCTGA

Upstream 100 bases:

>100_bases
AACAGACCCTGCGCGACCTCGACAAGCTGCTCAGCGACGACGACAAGCGCCTGATTCGGCGACACGAGGTCGACCTCTAC
GATGACAGCGGTCTGCCCCG

Downstream 100 bases:

>100_bases
GCCCCGCCTGAGATACATCCGTTATATGCATCGCGGATATGCATTAGTAGTATGCTCTCCGGGTGTGACGCGCACCATGA
TCGACATCGATGACGACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MIVDTSAIVAIVSGESGAQVLKEALERSPNSRMSAPNYVELCAIMQRRDRPEISRLVDRLLDDYGIQVEAVDADQARVAA
QAYRDYGRGSGHPARLNLGDTYSYALAQVTGEPLLFRGDDFTHTDIRPACT

Sequences:

>Translated_131_residues
MIVDTSAIVAIVSGESGAQVLKEALERSPNSRMSAPNYVELCAIMQRRDRPEISRLVDRLLDDYGIQVEAVDADQARVAA
QAYRDYGRGSGHPARLNLGDTYSYALAQVTGEPLLFRGDDFTHTDIRPACT
>Mature_131_residues
MIVDTSAIVAIVSGESGAQVLKEALERSPNSRMSAPNYVELCAIMQRRDRPEISRLVDRLLDDYGIQVEAVDADQARVAA
QAYRDYGRGSGHPARLNLGDTYSYALAQVTGEPLLFRGDDFTHTDIRPACT

Specific function: Unknown

COG id: COG3742

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0110 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2759_MYCTU (P67242)

Other databases:

- EMBL:   BX842580
- EMBL:   AE000516
- PIR:   F70880
- RefSeq:   NP_217275.1
- RefSeq:   NP_337334.1
- ProteinModelPortal:   P67242
- EnsemblBacteria:   EBMYCT00000003828
- EnsemblBacteria:   EBMYCT00000070919
- GeneID:   888293
- GeneID:   925457
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2829
- KEGG:   mtu:Rv2759c
- TIGR:   MT2829
- TubercuList:   Rv2759c
- GeneTree:   EBGT00050000018412
- HOGENOM:   HBG400859
- OMA:   IFIDASA
- ProtClustDB:   CLSK792058
- InterPro:   IPR002716

Pfam domain/function: PF01850 PIN

EC number: NA

Molecular weight: Translated: 14372; Mature: 14372

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDTSAIVAIVSGESGAQVLKEALERSPNSRMSAPNYVELCAIMQRRDRPEISRLVDRL
CEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
LDDYGIQVEAVDADQARVAAQAYRDYGRGSGHPARLNLGDTYSYALAQVTGEPLLFRGDD
HHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCEEEECCC
FTHTDIRPACT
CCCCCCCCCCC
>Mature Secondary Structure
MIVDTSAIVAIVSGESGAQVLKEALERSPNSRMSAPNYVELCAIMQRRDRPEISRLVDRL
CEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
LDDYGIQVEAVDADQARVAAQAYRDYGRGSGHPARLNLGDTYSYALAQVTGEPLLFRGDD
HHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCEEEECCC
FTHTDIRPACT
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036