| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823917
Identifier: 148823917
GI number: 148823917
Start: 3053525
End: 3054430
Strand: Reverse
Name: 148823917
Synonym: TBFG_12742
Alternate gene names: NA
Gene position: 3054430-3053525 (Counterclockwise)
Preceding gene: 148823920
Following gene: 148823916
Centisome position: 69.04
GC content: 65.34
Gene sequence:
>906_bases ATGGCCAGCGTCGAATTCGCGACCATTCTGGCGCTGGGCGCCGCGTTGCTGGCCGGGATCGGGTATGTGACACTTCAGCG GTCCGCGCGACAGGTCACCGCTGAAGAATATGTCGGCCATTTCACGTTGTTCCACCTCTCTTTGCGTCACGCTCTGTGGT GGCTGGGCAGCCTGGCCGCAGTCGCCAGTTTCACCCTGCAGGCCATTGCGCTGACGATGGGTTCGGTGGTGTTGGTGCAG TCGCTGCAGGCCACCGCACTGTTGTTCGCGCTGCTGATCGATGCTCGGTTGACTCATCACCGCTGTACTCCCAGGGAGTG GATGTGGGCGGTATTGCTGGCCGGCGCGGTGGCCGTCATCGTCATGTCGGGCAACCCGGCGGCCGGCACTACTCGGGCCC CCTTCTCGACCTGGGCGGTGGTTGCTGTCGTGGTTGTTCCGGCGGTGGTGCTTTGTGTGGTTGGTGCACGGATTGCCTCG GGTTCGCTGTCCGCGGTGCTGCTGGCGGTGGCGTCGTCGGCAACGTTGGCGGTATTCACCGTGCTGACCAAAGGGGTCGT GACGGAGCTCGGCGAGGGGTTCGCGACACTGATCCGGACCCCCGAGTTGTATGCCTGGATCCTGGTTCTACCGATCGGGC TGATGCTTCAGCAGTCGTCGTTGCGGGTGGGCGCGCTAACCGCCTCGTTGCCGACGATCACCGTGGCGAGGCCGGTGATC GCTTCGGTGCTGGGGATCACCGTGCTCGATGAGGTGCTGCACACCGGCCGGGTGGCCCTGGTCGCGCTGGTGGCAGCGGT AGTGGTGGTGGTTGTCGCGACCGTAGCCTTGGCCCGTGACGAGGTCGCGATGATGACGGTTTCCGCCGGCGAATTGGGGG CCGCGGGCCAGCTTGCGGTTCGTTGA
Upstream 100 bases:
>100_bases TTGTGATATTTGTCTGGCGCCAGTTCATCATCATTGAACAACTGCTTAAATCGAGATGTATCAGTCAGCTTCCGGGCCGA ATGTCGGTGGGAGGTCACCT
Downstream 100 bases:
>100_bases CCGTCTCTGGCCAATGAGCGCGGGACAGTGTCGGCCTCTCAGCACGGTCTCTTTGCAGCCGTTGCTCCACGAGGCCGAAT CCGCCCGCCAAGGCGTTAGC
Product: alanine, valine and leucine rich integral membrane protein
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MASVEFATILALGAALLAGIGYVTLQRSARQVTAEEYVGHFTLFHLSLRHALWWLGSLAAVASFTLQAIALTMGSVVLVQ SLQATALLFALLIDARLTHHRCTPREWMWAVLLAGAVAVIVMSGNPAAGTTRAPFSTWAVVAVVVVPAVVLCVVGARIAS GSLSAVLLAVASSATLAVFTVLTKGVVTELGEGFATLIRTPELYAWILVLPIGLMLQQSSLRVGALTASLPTITVARPVI ASVLGITVLDEVLHTGRVALVALVAAVVVVVVATVALARDEVAMMTVSAGELGAAGQLAVR
Sequences:
>Translated_301_residues MASVEFATILALGAALLAGIGYVTLQRSARQVTAEEYVGHFTLFHLSLRHALWWLGSLAAVASFTLQAIALTMGSVVLVQ SLQATALLFALLIDARLTHHRCTPREWMWAVLLAGAVAVIVMSGNPAAGTTRAPFSTWAVVAVVVVPAVVLCVVGARIAS GSLSAVLLAVASSATLAVFTVLTKGVVTELGEGFATLIRTPELYAWILVLPIGLMLQQSSLRVGALTASLPTITVARPVI ASVLGITVLDEVLHTGRVALVALVAAVVVVVVATVALARDEVAMMTVSAGELGAAGQLAVR >Mature_300_residues ASVEFATILALGAALLAGIGYVTLQRSARQVTAEEYVGHFTLFHLSLRHALWWLGSLAAVASFTLQAIALTMGSVVLVQS LQATALLFALLIDARLTHHRCTPREWMWAVLLAGAVAVIVMSGNPAAGTTRAPFSTWAVVAVVVVPAVVLCVVGARIASG SLSAVLLAVASSATLAVFTVLTKGVVTELGEGFATLIRTPELYAWILVLPIGLMLQQSSLRVGALTASLPTITVARPVIA SVLGITVLDEVLHTGRVALVALVAAVVVVVVATVALARDEVAMMTVSAGELGAAGQLAVR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008521 [H]
Pfam domain/function: PF05653 DUF803 [H]
EC number: NA
Molecular weight: Translated: 31086; Mature: 30955
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVEFATILALGAALLAGIGYVTLQRSARQVTAEEYVGHFTLFHLSLRHALWWLGSLAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VASFTLQAIALTMGSVVLVQSLQATALLFALLIDARLTHHRCTPREWMWAVLLAGAVAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE VMSGNPAAGTTRAPFSTWAVVAVVVVPAVVLCVVGARIASGSLSAVLLAVASSATLAVFT EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH VLTKGVVTELGEGFATLIRTPELYAWILVLPIGLMLQQSSLRVGALTASLPTITVARPVI HHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHCCCHHHHHHHHH ASVLGITVLDEVLHTGRVALVALVAAVVVVVVATVALARDEVAMMTVSAGELGAAGQLAV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCC R C >Mature Secondary Structure ASVEFATILALGAALLAGIGYVTLQRSARQVTAEEYVGHFTLFHLSLRHALWWLGSLAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VASFTLQAIALTMGSVVLVQSLQATALLFALLIDARLTHHRCTPREWMWAVLLAGAVAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE VMSGNPAAGTTRAPFSTWAVVAVVVVPAVVLCVVGARIASGSLSAVLLAVASSATLAVFT EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH VLTKGVVTELGEGFATLIRTPELYAWILVLPIGLMLQQSSLRVGALTASLPTITVARPVI HHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHCCCHHHHHHHHH ASVLGITVLDEVLHTGRVALVALVAAVVVVVVATVALARDEVAMMTVSAGELGAAGQLAV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8117072; 12948626 [H]