| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823877
Identifier: 148823877
GI number: 148823877
Start: 3015990
End: 3016703
Strand: Reverse
Name: 148823877
Synonym: TBFG_12702
Alternate gene names: NA
Gene position: 3016703-3015990 (Counterclockwise)
Preceding gene: 148823878
Following gene: 148823876
Centisome position: 68.18
GC content: 64.43
Gene sequence:
>714_bases ATGACCCGGTTGGTGCCTGCGCTGCGGCTCGAGCTGACGCTACAGGTGCGGCAGAAGTTCTTGCATGCCGCCGTTTTCTC CGGACTGATTTGGCTGGCAGTGCTGCTGCCGATGCCGGTCAGCCTGCGCCCGGTCGCCGAACCCTATGTCCTGGTGGGTG ATATCGCGATCATCGGGTTCTTCTTCGTCGGCGGGACCGTGTTCTTCGAGAAGCAGGAGCGCACGATCGGCGCGATCGTC TCGACGCCGCTGCGGTTCTGGGAGTACCTGGCTGCCAAACTAACTGTGCTGCTGGCGATCTCGCTGTTCGTTGCGGTTGT CGTGGCCACCATCGTTCACGGGCTTGGTTACCACCTGCTGCCGCTGGTGGCCGGCATCGTGCTGGGCACACTGCTGATGC TGCTGGTCGGCTTCAGTTCCTCGTTGCCGTTCGCCTCGGTGACCGATTGGTTCCTGGCGGCGGTCATCCCGCTCGCGATC ATGCTGGCGCCGCCGGTGGTGCACTACTCCGGCCTGTGGCCCAACCCGGTGCTTTACCTCATCCCCACCCAGGGGCCGCT GCTCTTGCTCGGCGCGGCGTTCGATCAGGTGAGCTTGGCGCCCTGGCAGGTCGGGTATGCGGTGGTCTACCCAATCGTGT GTGCGGCGGGATTGTGCCGGGCGGCCAAGGCGCTATTCGGCCGTTATGTCGTGCAAAGATCGGGTGTGCTGTGA
Upstream 100 bases:
>100_bases CGTTCCACTCCGTGCTGCGAAACCACCACGTCGAGACCATTCATAGCCGCGAGGCCAGCCTCGACGATGTCTTCGTCGAG GTCACCGGCAGGCAGCTGAC
Downstream 100 bases:
>100_bases GAGCGATATCGAGCCTTGCGGGCCCACGGGCGTTGGCCGCGTTCGGCCGCAACGACATTCGAGGCACCTACCGCGATCCG CTGCTGGTCATGCTCGTCAT
Product: antibiotic ABC transporter integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTRLVPALRLELTLQVRQKFLHAAVFSGLIWLAVLLPMPVSLRPVAEPYVLVGDIAIIGFFFVGGTVFFEKQERTIGAIV STPLRFWEYLAAKLTVLLAISLFVAVVVATIVHGLGYHLLPLVAGIVLGTLLMLLVGFSSSLPFASVTDWFLAAVIPLAI MLAPPVVHYSGLWPNPVLYLIPTQGPLLLLGAAFDQVSLAPWQVGYAVVYPIVCAAGLCRAAKALFGRYVVQRSGVL
Sequences:
>Translated_237_residues MTRLVPALRLELTLQVRQKFLHAAVFSGLIWLAVLLPMPVSLRPVAEPYVLVGDIAIIGFFFVGGTVFFEKQERTIGAIV STPLRFWEYLAAKLTVLLAISLFVAVVVATIVHGLGYHLLPLVAGIVLGTLLMLLVGFSSSLPFASVTDWFLAAVIPLAI MLAPPVVHYSGLWPNPVLYLIPTQGPLLLLGAAFDQVSLAPWQVGYAVVYPIVCAAGLCRAAKALFGRYVVQRSGVL >Mature_236_residues TRLVPALRLELTLQVRQKFLHAAVFSGLIWLAVLLPMPVSLRPVAEPYVLVGDIAIIGFFFVGGTVFFEKQERTIGAIVS TPLRFWEYLAAKLTVLLAISLFVAVVVATIVHGLGYHLLPLVAGIVLGTLLMLLVGFSSSLPFASVTDWFLAAVIPLAIM LAPPVVHYSGLWPNPVLYLIPTQGPLLLLGAAFDQVSLAPWQVGYAVVYPIVCAAGLCRAAKALFGRYVVQRSGVL
Specific function: Part of the ABC transporter complex Rv2686c/Rv2687c/Rv2688c involved in fluoroquinolones export. Confers resistance to ciprofloxacin and, to a lesser extent, norfloxacin, moxifloxacin and sparfloxacin. Probably responsible for the translocation of the sub
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FLQE3_MYCTU (O07189)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: B70529 - RefSeq: NP_217203.1 - RefSeq: NP_337262.1 - ProteinModelPortal: O07189 - EnsemblBacteria: EBMYCT00000000651 - EnsemblBacteria: EBMYCT00000072650 - GeneID: 888446 - GeneID: 925536 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2761 - KEGG: mtu:Rv2687c - TIGR: MT2761 - TubercuList: Rv2687c - GeneTree: EBGT00050000017711 - HOGENOM: HBG566756 - OMA: VGTEIFA - ProtClustDB: CLSK792005
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25576; Mature: 25445
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c9c9508)-; HASH(0x1c9a169c)-; HASH(0x1c87738c)-; HASH(0x1bc7a214)-; HASH(0x1c7ed8e4)-; HASH(0x1c97748c)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLVPALRLELTLQVRQKFLHAAVFSGLIWLAVLLPMPVSLRPVAEPYVLVGDIAIIGF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FFVGGTVFFEKQERTIGAIVSTPLRFWEYLAAKLTVLLAISLFVAVVVATIVHGLGYHLL HHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVAGIVLGTLLMLLVGFSSSLPFASVTDWFLAAVIPLAIMLAPPVVHYSGLWPNPVLYL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEE IPTQGPLLLLGAAFDQVSLAPWQVGYAVVYPIVCAAGLCRAAKALFGRYVVQRSGVL EECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure TRLVPALRLELTLQVRQKFLHAAVFSGLIWLAVLLPMPVSLRPVAEPYVLVGDIAIIGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FFVGGTVFFEKQERTIGAIVSTPLRFWEYLAAKLTVLLAISLFVAVVVATIVHGLGYHLL HHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVAGIVLGTLLMLLVGFSSSLPFASVTDWFLAAVIPLAIMLAPPVVHYSGLWPNPVLYL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEE IPTQGPLLLLGAAFDQVSLAPWQVGYAVVYPIVCAAGLCRAAKALFGRYVVQRSGVL EECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036