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The map label for this gene is yhcM [H]

Identifier: 148823861

GI number: 148823861

Start: 2997690

End: 2998799

Strand: Reverse

Name: yhcM [H]

Synonym: TBFG_12685

Alternate gene names: 148823861

Gene position: 2998799-2997690 (Counterclockwise)

Preceding gene: 148823865

Following gene: 148823852

Centisome position: 67.78

GC content: 64.95

Gene sequence:

>1110_bases
ATGACCTTGATTGCAGCACGTCGCTACAGTGCCACCATGCACGGGTCTGCCTCCGAAGCTTGCGGTTCGGTGGACCACCT
GGTGGACAGGCATCCGACCGTGTCTCCGGTGCGGCTGATCGCCCAACTGCGGCCGCCTCCGACGTTCGCCGAGGTGAGCT
TCGCGACGTATCGACCTGACCCGGTTGAACCCACCCAGGCGGCCGCCGTCGTGGCGTGCCAGGACTTTTGCCGGCAGGCC
GTCGAGCGGCGTGCAGGCCGCAAGAAATGGTTCGGCAAGCGCGACGTGTTGCCCGGTGTGGGGCTGTACCTGGACGGTGG
GTTCGGGGTAGGCAAGACGCACCTGCTGGCCTCTGCCTACTACCAGCTGCCTGGAACCGGCCCGGACGCGCCGACATGTC
CAAAGGCATTCGCGACGTTCGGTGAGCTGACCCAGCTGGCCGGTGTGTTCGGCTTCGCCGACTGTATCGATCTGTTGGCC
AATTACACCGCTTTATGTATCGACGAGTTCGAGCTGGACGATCCGGGCAACACCACGCTGATCTCCCGGCTGCTTTCGGC
TCTGGTCGAGCGGGGGGTTTCGGTGGCCGCCACCTCCAACACACTGCCCGAACAGCTCGGCGAGGGCCGCTTCGCCGCCC
AGGACTTTCTACGCGAGATCAACACCCTGGCAAGCATTTTCACCACGGTGAGGATCGAGGGTCCGGACTACCGACACCGT
GATCTGCCGCCGGCACCGGCGCCGCTGTCCGACGAGGAGGTGGCCGCGCGTGCCGCACGTGTTGAGGGGGCGACCCTTGA
CGACTTCGACGCGCTGTGCGCGCACCTGGCCACCATGCATCCGTCGCGATATCTGACCCTGATCGAAGGTGTGACCGCGG
TGTTTCTGACCGGCGTGCACGGCATCGACGACCAGAACGTTGCGCTGCGGTTGGTGGCGCTCGTTGATCGGCTCTATGAC
GCCGGCATTCCGGTGGTGGCGTCCGGCGCTAAGCTGGACACCATCTTCAGCGAGGAAATGCTGGCCGGTGGATACCGAAA
GAAGTACCTGCGGGCCACATCTCGCCTGCTGGCCCTGACGGCGGGGGTCATACAAGCTCGCGAACCATGA

Upstream 100 bases:

>100_bases
ATAGTCGTAAAGCTGGGGGAGTTCGCCGTCGGTGAGGTAATGCACCGAGCTGAGCAGCCTTAGCGGGGTGTCAGCGGCTC
CGAGCTGACCAGAGTCGGGC

Downstream 100 bases:

>100_bases
CGTAGTCATTCTCGTGGTGGGCTCCCAGTCGAAACGTCCTGGTGCCGTTGATCTTGAAACCAGTCTTCGCGTAGAAGCGT
TGTGCGCGTTGGTTTTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQA
VERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLA
NYTALCIDEFELDDPGNTTLISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHR
DLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYD
AGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP

Sequences:

>Translated_369_residues
MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQA
VERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLA
NYTALCIDEFELDDPGNTTLISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHR
DLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYD
AGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP
>Mature_368_residues
TLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAV
ERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLAN
YTALCIDEFELDDPGNTTLISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHRD
LPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYDA
GIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Escherichia coli, GI1789627, Length=320, Percent_Identity=27.1875, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 39660; Mature: 39528

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPD
CCEEECHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEEEECCCC
PVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
YQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLANYTALCIDEFELDDPGNTTL
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHH
ISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHR
HHHHHHHHHHCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
DLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVH
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
GIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALT
CCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AGVIQAREP
HHHHHCCCC
>Mature Secondary Structure 
TLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPD
CEEECHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEEEECCCC
PVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
YQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLANYTALCIDEFELDDPGNTTL
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHH
ISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHR
HHHHHHHHHHCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
DLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVH
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
GIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALT
CCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AGVIQAREP
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]