Click here to switch to the map view.

The map label for this gene is 148823857

Identifier: 148823857

GI number: 148823857

Start: 2995855

End: 2996613

Strand: Direct

Name: 148823857

Synonym: TBFG_12682

Alternate gene names: NA

Gene position: 2995855-2996613 (Clockwise)

Preceding gene: 148823856

Following gene: 148823858

Centisome position: 67.71

GC content: 67.59

Gene sequence:

>759_bases
ATGCCGGAGCCCACACCCACCGCCTACCCCGTCCGCCTCGACGAGCTCATCAACGCCATCAAACGGGTGCACAGCGACGT
GTTGGACCAACTCAGCGACGCCGTCCTGGCCGCCGAGCATCTCGGCGAAATCGCCGATCACTTAATCGGCCACTTCGTCG
ATCAGGCCCGCCGCTCGGGCGCCTCCTGGTCCGATATCGGCAAGAGCATGGGCGTCACCAAACAGGCCGCGCAAAAGCGG
TTCGTCCCCCGAGCCGAAGCCACCACACTGGATTCAAACCAGGGCTTCAGGCGTTTCACGCCGCGGGCCCGCAACGCCGT
GGTCGCGGCCCAAAACGCCGCGCACGGAGCCGCCAGCAGCGAGATCACCCCCGATCACCTGTTGTTGGGAGTGCTCACTG
ACCCGGCCGCACTGGCCACGGCGTTGCTTCAGCAGCAGGAGATCGACATCGCAACCCTGCGTACGGCGGTCACGCTCCCC
CCGGCAGTCACCGAGCCGCCTCAGCCGATCCCGTTCAGCGGCCCGGCGCGCAAGGTCCTCGAGCTCACCTTCCGCGAGGC
GCTTCGGCTGGGCCACAACTACATCGGGACCGAACACCTGCTGCTGGCACTGCTAGAACTCGAGGACGGGGATGGGCCGT
TGCATCGATCCGGCGTCGACAAGAGCCGCGCCGAGGCCGACCTGATCACCACGCTCGCATCGCTCACCGGCGCCAACGCT
GCCGGCGCAACCGATGCCGGCGCAACCGATGCCGGCTGA

Upstream 100 bases:

>100_bases
CGGCGCCACCCTGCCCGCAGCGGCCTGGCAGCGCTGCAGAACCCACTACGCAGCCAATCACGGTCGACACAATGCATAAC
GTCAACCTACTGTTGACGTC

Downstream 100 bases:

>100_bases
GGCGAGCGACCCCTCCCCTTCGCGGCGCCGCGTGTGCAATCATGCGAAGGTCCCCCACCGGGAGCCGAGGAGGCACAGAT
GCGCCGCTGGCTGATCGTCC

Product: ATP-dependent protease ATP-binding subunit clpC2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPEPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGASWSDIGKSMGVTKQAAQKR
FVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEITPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLP
PAVTEPPQPIPFSGPARKVLELTFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTGANA
AGATDAGATDAG

Sequences:

>Translated_252_residues
MPEPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGASWSDIGKSMGVTKQAAQKR
FVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEITPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLP
PAVTEPPQPIPFSGPARKVLELTFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTGANA
AGATDAGATDAG
>Mature_251_residues
PEPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGASWSDIGKSMGVTKQAAQKRF
VPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEITPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPP
AVTEPPQPIPFSGPARKVLELTFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTGANAA
GATDAGATDAG

Specific function: Unknown

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family. ClpC subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2667_MYCTU (P0A524)

Other databases:

- EMBL:   BX842580
- EMBL:   AE000516
- PIR:   G70967
- RefSeq:   NP_337242.1
- RefSeq:   YP_177897.1
- ProteinModelPortal:   P0A524
- EnsemblBacteria:   EBMYCT00000003294
- EnsemblBacteria:   EBMYCT00000072568
- GeneID:   887415
- GeneID:   925556
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2741
- KEGG:   mtu:Rv2667
- TIGR:   MT2741
- TubercuList:   Rv2667
- GeneTree:   EBGT00070000031953
- HOGENOM:   HBG484352
- OMA:   GASWTEI
- ProtClustDB:   CLSK881400
- GO:   GO:0005829
- InterPro:   IPR004176
- InterPro:   IPR023150
- Gene3D:   G3DSA:1.10.1780.10

Pfam domain/function: PF02861 Clp_N

EC number: NA

Molecular weight: Translated: 26627; Mature: 26496

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASWSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASS
CCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHEEEECCCCCCCCCC
EITPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVL
CCCHHHHEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ELTFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTGANA
HHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
AGATDAGATDAG
CCCCCCCCCCCC
>Mature Secondary Structure 
PEPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASWSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASS
CCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHEEEECCCCCCCCCC
EITPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVL
CCCHHHHEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ELTFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTGANA
HHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
AGATDAGATDAG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036