| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823842
Identifier: 148823842
GI number: 148823842
Start: 2987201
End: 2987734
Strand: Reverse
Name: 148823842
Synonym: TBFG_12667
Alternate gene names: NA
Gene position: 2987734-2987201 (Counterclockwise)
Preceding gene: 148823843
Following gene: 148823841
Centisome position: 67.53
GC content: 65.92
Gene sequence:
>534_bases TTGAGTAGCATCCTTTTCCGCACGGCCGAGCTGCGGCCTGGTGAGGGCCGCACCGTGTACGGCGTCATCGTGCCTTATGG CGAGGTGACCACCGTCCGCGACCTCGACGGCGAGTTCCGGGAAATGTTCGCTCCTGGCGCTTTTCGGCGCTCCATCGCTG AGCGCGGCCACAAGGTGAAGCTGCTGGTCTCCCACGACGCTCGAACCCGCTACCCGGTTGGCCGGGCCGTCGAGCTGCGT GAGGAGCCTCACGGCTTGTTCGGGGCGTTCGAGCTTGCGAACACCCCGGACGGCGACGAGGCCCTGGCGAATGTGAAAGC TGGTGTGGTGGACGCGTTTTCGGTGGGTTTCCGGCCGATCCGGGACCGCCGGGAAGGGGATGTGATCGTGCGGGTCGAGG CGGCGCTGTTGGAGGTCTCCTTGACCGGCGTTCCGGCCTATCTGGGCGCGCAGATCGCCGGTGTGCGCGCGGAATCGCTT GCAGTCGTTTCCCGTTCGCTAGCCGAAGCCAGGTTAGCCCTGATGGATTGGTAA
Upstream 100 bases:
>100_bases CCGGGCAGTCGCCGCGGGGCGGCTGGAACCCGGATAGCGGCCGCCATGCGCCACAAGCGATTCCGCGCGTTTCTTGCGTC TGCTAGGCGGTGGCCGAATT
Downstream 100 bases:
>100_bases CTCTCTCATGACTAATGAACAACATTTCGCTGACGATGGCGACATCAAACAGCTCAGCCTCGACGAAACCCGTTCCGCGG CAAAACAGCTCCTCGACTCC
Product: phiRv2 prophage protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSSILFRTAELRPGEGRTVYGVIVPYGEVTTVRDLDGEFREMFAPGAFRRSIAERGHKVKLLVSHDARTRYPVGRAVELR EEPHGLFGAFELANTPDGDEALANVKAGVVDAFSVGFRPIRDRREGDVIVRVEAALLEVSLTGVPAYLGAQIAGVRAESL AVVSRSLAEARLALMDW
Sequences:
>Translated_177_residues MSSILFRTAELRPGEGRTVYGVIVPYGEVTTVRDLDGEFREMFAPGAFRRSIAERGHKVKLLVSHDARTRYPVGRAVELR EEPHGLFGAFELANTPDGDEALANVKAGVVDAFSVGFRPIRDRREGDVIVRVEAALLEVSLTGVPAYLGAQIAGVRAESL AVVSRSLAEARLALMDW >Mature_176_residues SSILFRTAELRPGEGRTVYGVIVPYGEVTTVRDLDGEFREMFAPGAFRRSIAERGHKVKLLVSHDARTRYPVGRAVELRE EPHGLFGAFELANTPDGDEALANVKAGVVDAFSVGFRPIRDRREGDVIVRVEAALLEVSLTGVPAYLGAQIAGVRAESLA VVSRSLAEARLALMDW
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19292; Mature: 19161
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSILFRTAELRPGEGRTVYGVIVPYGEVTTVRDLDGEFREMFAPGAFRRSIAERGHKVK CCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCHHHHHHHHCCCEEE LLVSHDARTRYPVGRAVELREEPHGLFGAFELANTPDGDEALANVKAGVVDAFSVGFRPI EEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHCCCCCC RDRREGDVIVRVEAALLEVSLTGVPAYLGAQIAGVRAESLAVVSRSLAEARLALMDW CCCCCCCEEEEEEEEEEEEEECCCCHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSILFRTAELRPGEGRTVYGVIVPYGEVTTVRDLDGEFREMFAPGAFRRSIAERGHKVK CCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCHHHHHHHHCCCEEE LLVSHDARTRYPVGRAVELREEPHGLFGAFELANTPDGDEALANVKAGVVDAFSVGFRPI EEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHCCCCCC RDRREGDVIVRVEAALLEVSLTGVPAYLGAQIAGVRAESLAVVSRSLAEARLALMDW CCCCCCCEEEEEEEEEEEEEECCCCHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA