| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823821
Identifier: 148823821
GI number: 148823821
Start: 2966824
End: 2968065
Strand: Reverse
Name: 148823821
Synonym: TBFG_12646
Alternate gene names: NA
Gene position: 2968065-2966824 (Counterclockwise)
Preceding gene: 148823826
Following gene: 148823820
Centisome position: 67.08
GC content: 62.08
Gene sequence:
>1242_bases ATGGCAAGTTCTGCGAGCGACGGCACCCACGAACGCTCGGCTTTTCGCCTGAGTCCACCGGTCTTGAGCGGCGCCATGGG ACCGTTCATGCACACCGGTCTGTACGTCGCTCAATCGTGGCGCGACTATCTGGGTCAACAGCCCGATAAACTGCCGATCG CACGGCCCACTATTGCCTTAGCGGCGCAAGCCTTTCGAGACGAAATCGTCCTGCTGGGCCTCAAGGCACGACGTCCGGTC AGCAATCATCGAGTGTTCGAGCGCATCAGCCAAGAAGTGGCCGCTGGACTGGAGTTCTATGGGAATCGCGGATGGCTGGA GAAGCCTAGCGGATTTTTTGCCCAGCCCCCACCGCTCACCGAGGTCGCGGTCCGAAAGGTCAAGGACCGCAGACGCTCCT TTTATCGCATCTTCTTCGACAGTGGGTTTACGCCGCATCCGGGTGAACCGGGCAGCCAACGGTGGCTCTCATACACTGCG AACAATCGCGAGTACGCCCTGTTACTGCGGCACCCAGAGCCGCGTCCCTGGCTGGTTTGTGTACACGGCACCGAGATGGG CAGGGCCCCGTTGGATCTCGCGGTGTTCCGCGCCTGGAAGCTGCATGACGAACTCGGCCTGAACATTGTCATGCCGGTTC TTCCGATGCATGGTCCCCGCGGGCAAGGTCTGCCGAAGGGCGCCGTTTTTCCCGGAGAAGATGTTCTCGACGATGTGCAT GGGACGGCTCAAGCGGTGTGGGATATCCGGCGGCTGTTGTCCTGGATACGATCGCAGGAGGAGGAGTCGCTGATCGGGTT GAACGGTCTCTCGCTGGGCGGCTACATCGCGTCATTGGTCGCCAGCCTCGAAGAAGGTCTCGCCTGCGCGATTCTCGGTG TCCCAGTGGCTGATCTGATCGAGTTGTTGGGCCGCCACTGCGGTCTTCGGCACAAAGACCCCCGCCGCCACACCGTCAAG ATGGCCGAACCGATCGGCCGAATGATCTCGCCGCTCTCACTTACGCCACTGGTGCCCATGCCGGGCCGCTTTATCTACGC GGGCATTGCCGACCGACTCGTGCATCCACGCGAACAGGTGACTCGCCTCTGGGAGCACTGGGGCAAACCCGAAATCGTGT GGTATCCAGGCGGTCACACTGGCTTCTTCCAGTCGCGGCCGGTACGACGGTTTGTCCAGGCTGCGCTGGAGCAGTCGGGC CTGTTGGACGCGCCACGGACACAGCGCGACCGTTCCGCCTAA
Upstream 100 bases:
>100_bases ACGGGCCGCCGGTCTCGACAGTGGCCACCACCACACAGGTGACTTCCGGCGGGACGTAAGTCCCTAACGCGTCGTTCCGC ACGCGGTTAGCTTTGCTGCC
Downstream 100 bases:
>100_bases CTCCGCGCCGAGCGTGGGCTGGCTGCGCCGAATGTGCACTGGTGGCGGAGACACACCCAGGCGATGCCGCCCTGGTTGCA CGTTCGGCGTGTCAGCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MASSASDGTHERSAFRLSPPVLSGAMGPFMHTGLYVAQSWRDYLGQQPDKLPIARPTIALAAQAFRDEIVLLGLKARRPV SNHRVFERISQEVAAGLEFYGNRGWLEKPSGFFAQPPPLTEVAVRKVKDRRRSFYRIFFDSGFTPHPGEPGSQRWLSYTA NNREYALLLRHPEPRPWLVCVHGTEMGRAPLDLAVFRAWKLHDELGLNIVMPVLPMHGPRGQGLPKGAVFPGEDVLDDVH GTAQAVWDIRRLLSWIRSQEEESLIGLNGLSLGGYIASLVASLEEGLACAILGVPVADLIELLGRHCGLRHKDPRRHTVK MAEPIGRMISPLSLTPLVPMPGRFIYAGIADRLVHPREQVTRLWEHWGKPEIVWYPGGHTGFFQSRPVRRFVQAALEQSG LLDAPRTQRDRSA
Sequences:
>Translated_413_residues MASSASDGTHERSAFRLSPPVLSGAMGPFMHTGLYVAQSWRDYLGQQPDKLPIARPTIALAAQAFRDEIVLLGLKARRPV SNHRVFERISQEVAAGLEFYGNRGWLEKPSGFFAQPPPLTEVAVRKVKDRRRSFYRIFFDSGFTPHPGEPGSQRWLSYTA NNREYALLLRHPEPRPWLVCVHGTEMGRAPLDLAVFRAWKLHDELGLNIVMPVLPMHGPRGQGLPKGAVFPGEDVLDDVH GTAQAVWDIRRLLSWIRSQEEESLIGLNGLSLGGYIASLVASLEEGLACAILGVPVADLIELLGRHCGLRHKDPRRHTVK MAEPIGRMISPLSLTPLVPMPGRFIYAGIADRLVHPREQVTRLWEHWGKPEIVWYPGGHTGFFQSRPVRRFVQAALEQSG LLDAPRTQRDRSA >Mature_412_residues ASSASDGTHERSAFRLSPPVLSGAMGPFMHTGLYVAQSWRDYLGQQPDKLPIARPTIALAAQAFRDEIVLLGLKARRPVS NHRVFERISQEVAAGLEFYGNRGWLEKPSGFFAQPPPLTEVAVRKVKDRRRSFYRIFFDSGFTPHPGEPGSQRWLSYTAN NREYALLLRHPEPRPWLVCVHGTEMGRAPLDLAVFRAWKLHDELGLNIVMPVLPMHGPRGQGLPKGAVFPGEDVLDDVHG TAQAVWDIRRLLSWIRSQEEESLIGLNGLSLGGYIASLVASLEEGLACAILGVPVADLIELLGRHCGLRHKDPRRHTVKM AEPIGRMISPLSLTPLVPMPGRFIYAGIADRLVHPREQVTRLWEHWGKPEIVWYPGGHTGFFQSRPVRRFVQAALEQSGL LDAPRTQRDRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019149 [H]
Pfam domain/function: PF09752 DUF2048 [H]
EC number: NA
Molecular weight: Translated: 46154; Mature: 46023
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSASDGTHERSAFRLSPPVLSGAMGPFMHTGLYVAQSWRDYLGQQPDKLPIARPTIAL CCCCCCCCCCCCCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH AAQAFRDEIVLLGLKARRPVSNHRVFERISQEVAAGLEFYGNRGWLEKPSGFFAQPPPLT HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH EVAVRKVKDRRRSFYRIFFDSGFTPHPGEPGSQRWLSYTANNREYALLLRHPEPRPWLVC HHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCHHEEEECCCCEEEEEEECCCCCCEEEE VHGTEMGRAPLDLAVFRAWKLHDELGLNIVMPVLPMHGPRGQGLPKGAVFPGEDVLDDVH EECCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHH GTAQAVWDIRRLLSWIRSQEEESLIGLNGLSLGGYIASLVASLEEGLACAILGVPVADLI HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHH ELLGRHCGLRHKDPRRHTVKMAEPIGRMISPLSLTPLVPMPGRFIYAGIADRLVHPREQV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHCCCHHHH TRLWEHWGKPEIVWYPGGHTGFFQSRPVRRFVQAALEQSGLLDAPRTQRDRSA HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ASSASDGTHERSAFRLSPPVLSGAMGPFMHTGLYVAQSWRDYLGQQPDKLPIARPTIAL CCCCCCCCCCCCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH AAQAFRDEIVLLGLKARRPVSNHRVFERISQEVAAGLEFYGNRGWLEKPSGFFAQPPPLT HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH EVAVRKVKDRRRSFYRIFFDSGFTPHPGEPGSQRWLSYTANNREYALLLRHPEPRPWLVC HHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCHHEEEECCCCEEEEEEECCCCCCEEEE VHGTEMGRAPLDLAVFRAWKLHDELGLNIVMPVLPMHGPRGQGLPKGAVFPGEDVLDDVH EECCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHH GTAQAVWDIRRLLSWIRSQEEESLIGLNGLSLGGYIASLVASLEEGLACAILGVPVADLI HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHH ELLGRHCGLRHKDPRRHTVKMAEPIGRMISPLSLTPLVPMPGRFIYAGIADRLVHPREQV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHCCCHHHH TRLWEHWGKPEIVWYPGGHTGFFQSRPVRRFVQAALEQSGLLDAPRTQRDRSA HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]