| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823756
Identifier: 148823756
GI number: 148823756
Start: 2893393
End: 2894370
Strand: Direct
Name: 148823756
Synonym: TBFG_12581
Alternate gene names: NA
Gene position: 2893393-2894370 (Clockwise)
Preceding gene: 148823754
Following gene: 148823757
Centisome position: 65.4
GC content: 66.26
Gene sequence:
>978_bases ATGAGCCAGCCGCCAGAACATCCAGGCAATCCGGCCGACCCCCAGGGCGGCAATCAGGGCGCTGGAAGCTACCCGCCGCC CGGCTACGGAGCGCCTCCCCCGCCACCAGGCTACGGCCCACCCCCGGGGACCTACCTGCCTCCCGGCTACAACGCACCCC CGCCGCCCCCCGGCTATGGCCCACCGCCGGGCCCGCCGCCTCCCGGTTACCCGACGCATCTGCAATCGTCGGGTTTTAGC GTGGGCGACGCGATCAGTTGGTCATGGAATAGGTTCACGCAGAACGCCGTAACGCTCGTCGTCCCGGTGCTCGCCTACGC TGTGGCGTTGGCCGCGGTCATCGGCGCGACGGCCGGGCTCGTTGTCGCCCTATCGGACCGTGCTACTACCGCATACACCA ACACCTCCGGCGTCTCTAGCGAATCCGTGGACATCACGATGACCCCGGCCGCGGGCATAGTCATGTTCCTCGGCTACATC GCTCTATTCGCCCTGGTGCTCTACATGCACGCCGGAATTCTGACCGGCTGCCTTGACATTGCCGACGGAAAGCCGGTGAC CATCGCGACGTTCTTTAGGCCGCGCAATCTGGGCCTGGTGCTGGTCACCGGACTGCTGATCGTCGCCCTCACCTTCATTG GTGGCCTGCTCTGTGTCATTCCCGGCCTGATCTTTGGCTTCGTCGCCCAGTTCGCCGTCGCTTTTGCCGTCGACCGTTCC ACTTCGCCGATCGACTCGGTAAAGGCCAGCATCGAGACGGTCGGGTCCAACATCGGTGGCAGTGTGCTGTCGTGGCTCGC TCAGCTCACGGCGGTGCTCGTCGGCGAACTGCTGTGCTTTGTCGGCATGCTGATCGGCATTCCGGTCGCCGCGCTCATCC ACGTCTACACCTACCGGAAGCTGTCGGGTGGCCAAGTCGTTGAGGCAGTCCGGCCAGCGCCCCCGGTCGGCTGGCCGCCC GGCCCCCAGCTCGCATAG
Upstream 100 bases:
>100_bases GAATAATCCGCGCGCCTTCGGCAAATATTTGCTAAGTTCCGGTTTGCTTAGCGTCGCGCGGGTACCGATAAAAGCGAACT ACGAAGCGATTGGGACAGCG
Downstream 100 bases:
>100_bases TCGGCACCCGCCGACGCCGGCTGGCCGTCTTGGCCCGCTGGATTTGTCACGCGCTCACCCGAATTGGCATCCGGGGCCTG GAACGCGTTAGGGCAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSQPPEHPGNPADPQGGNQGAGSYPPPGYGAPPPPPGYGPPPGTYLPPGYNAPPPPPGYGPPPGPPPPGYPTHLQSSGFS VGDAISWSWNRFTQNAVTLVVPVLAYAVALAAVIGATAGLVVALSDRATTAYTNTSGVSSESVDITMTPAAGIVMFLGYI ALFALVLYMHAGILTGCLDIADGKPVTIATFFRPRNLGLVLVTGLLIVALTFIGGLLCVIPGLIFGFVAQFAVAFAVDRS TSPIDSVKASIETVGSNIGGSVLSWLAQLTAVLVGELLCFVGMLIGIPVAALIHVYTYRKLSGGQVVEAVRPAPPVGWPP GPQLA
Sequences:
>Translated_325_residues MSQPPEHPGNPADPQGGNQGAGSYPPPGYGAPPPPPGYGPPPGTYLPPGYNAPPPPPGYGPPPGPPPPGYPTHLQSSGFS VGDAISWSWNRFTQNAVTLVVPVLAYAVALAAVIGATAGLVVALSDRATTAYTNTSGVSSESVDITMTPAAGIVMFLGYI ALFALVLYMHAGILTGCLDIADGKPVTIATFFRPRNLGLVLVTGLLIVALTFIGGLLCVIPGLIFGFVAQFAVAFAVDRS TSPIDSVKASIETVGSNIGGSVLSWLAQLTAVLVGELLCFVGMLIGIPVAALIHVYTYRKLSGGQVVEAVRPAPPVGWPP GPQLA >Mature_324_residues SQPPEHPGNPADPQGGNQGAGSYPPPGYGAPPPPPGYGPPPGTYLPPGYNAPPPPPGYGPPPGPPPPGYPTHLQSSGFSV GDAISWSWNRFTQNAVTLVVPVLAYAVALAAVIGATAGLVVALSDRATTAYTNTSGVSSESVDITMTPAAGIVMFLGYIA LFALVLYMHAGILTGCLDIADGKPVTIATFFRPRNLGLVLVTGLLIVALTFIGGLLCVIPGLIFGFVAQFAVAFAVDRST SPIDSVKASIETVGSNIGGSVLSWLAQLTAVLVGELLCFVGMLIGIPVAALIHVYTYRKLSGGQVVEAVRPAPPVGWPPG PQLA
Specific function: Unknown
COG id: COG5473
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018692 [H]
Pfam domain/function: PF09955 DUF2189 [H]
EC number: NA
Molecular weight: Translated: 33139; Mature: 33008
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPPEHPGNPADPQGGNQGAGSYPPPGYGAPPPPPGYGPPPGTYLPPGYNAPPPPPGYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPGPPPPGYPTHLQSSGFSVGDAISWSWNRFTQNAVTLVVPVLAYAVALAAVIGATAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE VVALSDRATTAYTNTSGVSSESVDITMTPAAGIVMFLGYIALFALVLYMHAGILTGCLDI EEEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADGKPVTIATFFRPRNLGLVLVTGLLIVALTFIGGLLCVIPGLIFGFVAQFAVAFAVDRS CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSPIDSVKASIETVGSNIGGSVLSWLAQLTAVLVGELLCFVGMLIGIPVAALIHVYTYRK CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGGQVVEAVRPAPPVGWPPGPQLA CCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SQPPEHPGNPADPQGGNQGAGSYPPPGYGAPPPPPGYGPPPGTYLPPGYNAPPPPPGYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPGPPPPGYPTHLQSSGFSVGDAISWSWNRFTQNAVTLVVPVLAYAVALAAVIGATAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE VVALSDRATTAYTNTSGVSSESVDITMTPAAGIVMFLGYIALFALVLYMHAGILTGCLDI EEEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADGKPVTIATFFRPRNLGLVLVTGLLIVALTFIGGLLCVIPGLIFGFVAQFAVAFAVDRS CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSPIDSVKASIETVGSNIGGSVLSWLAQLTAVLVGELLCFVGMLIGIPVAALIHVYTYRK CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGGQVVEAVRPAPPVGWPPGPQLA CCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]