Click here to switch to the map view.

The map label for this gene is 148823753

Identifier: 148823753

GI number: 148823753

Start: 2890390

End: 2891064

Strand: Direct

Name: 148823753

Synonym: TBFG_12578

Alternate gene names: NA

Gene position: 2890390-2891064 (Clockwise)

Preceding gene: 148823743

Following gene: 148823754

Centisome position: 65.33

GC content: 65.04

Gene sequence:

>675_bases
TTGACCGGTGGCGCCACCGGGGCGCTGCCCCGAACAATGAAAGAGGGGTGGATCGTGTACGCGCGCTCTACCACTATTCA
GGCGCAATCCGAGTGCATCGACACCGGAATTGCGCACGTTCGCGATGTGGTTATGCCCGCACTGCAGGGGATGGATGGGT
GCATCGGCGTATCCCTTTTGGTCGACCGGCAATCCGGCAGGTGCATCGCCACCAGTGCCTGGGAGACCGCGGAAGCCATG
CATGCAAGCCGGGAACAGGTAACGCCGATCCGCGATCGGTGCGCGGAGATGTTCGGCGGCACGCCGGCCGTCGAGGAGTG
GGAGATCGCGGCGATGCATCGCGACCACCGCTCGGCCGAGGGGGCGTGTGTGCGGGCGACCTGGGTCAAGGTGCCGGCGG
ACCAAGTAGATCAAGGCATCGAGTACTACAAGTCGTCCGTCCTGCCCCAAATCGAAGGCCTCGACGGATTCTGCAGCGCC
AGCCTGTTGGTCGACCGCACCTCCGGGCGCGCGGTGTCTTCCGCGACCTTCGACAGCTTTGACGCCATGGAGCGCAACCG
GGACCAGTCGAATGCGCTCAAGGCCACATCGCTGCGTGAGGCGGGCGGCGAGGAACTCGATGAATGCGAGTTCGAGCTGG
CGCTAGCGCACCTACGGGTACCCGAGCTGGTCTGA

Upstream 100 bases:

>100_bases
ATCCACCCGTCCCAGCCTACGGTGGGGGCGCGCCAACCTGCCAATCCATTGACGTCGGATTGCCCATTGCCCCGGCCGGC
CCGTCGGAGGAAGGTAATGA

Downstream 100 bases:

>100_bases
TCAACCCGCCGGCGGCAGTACCGGCCCGAGCCCGACGCTGGGCCGGCACTGCTGTCGTGCGTCGAGCGGCGCTCGCGGTA
GGCATTGCCAGGCTCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTGGATGALPRTMKEGWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLLVDRQSGRCIATSAWETAEAM
HASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAEGACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSA
SLLVDRTSGRAVSSATFDSFDAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV

Sequences:

>Translated_224_residues
MTGGATGALPRTMKEGWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLLVDRQSGRCIATSAWETAEAM
HASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAEGACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSA
SLLVDRTSGRAVSSATFDSFDAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV
>Mature_223_residues
TGGATGALPRTMKEGWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLLVDRQSGRCIATSAWETAEAMH
ASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAEGACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSAS
LLVDRTSGRAVSSATFDSFDAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2558

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2557_MYCTU (P65003)

Other databases:

- EMBL:   BX842580
- EMBL:   AE000516
- PIR:   A70728
- RefSeq:   NP_217073.1
- RefSeq:   NP_337132.1
- EnsemblBacteria:   EBMYCT00000000820
- EnsemblBacteria:   EBMYCT00000070937
- GeneID:   887865
- GeneID:   925681
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2634
- KEGG:   mtu:Rv2557
- TIGR:   MT2634
- TubercuList:   Rv2557
- GeneTree:   EBGT00050000018190
- HOGENOM:   HBG565272
- ProtClustDB:   CLSK791923
- InterPro:   IPR011008

Pfam domain/function: SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 24296; Mature: 24164

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGATGALPRTMKEGWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLL
CCCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
VDRQSGRCIATSAWETAEAMHASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAE
EECCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
GACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSASLLVDRTSGRAVSSATFDSF
CCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCEECCCCHHHH
DAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TGGATGALPRTMKEGWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLL
CCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
VDRQSGRCIATSAWETAEAMHASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAE
EECCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
GACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSASLLVDRTSGRAVSSATFDSF
CCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCEECCCCHHHH
DAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036