| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823605
Identifier: 148823605
GI number: 148823605
Start: 2713182
End: 2715110
Strand: Direct
Name: 148823605
Synonym: TBFG_12430
Alternate gene names: NA
Gene position: 2713182-2715110 (Clockwise)
Preceding gene: 148823599
Following gene: 148823607
Centisome position: 61.32
GC content: 66.04
Gene sequence:
>1929_bases ATGGCTCTATCGTCCAGTTCGCCACTGCGCAACCCGTTTCCGCCGATCGCCGACTACGCGTTCTTGTCCGATTGGGAAAC GACGTGCCTGATTTCGCCGGCGGGTTCGGTGGAGTGGCTGTGTGTGCCACGGCCGGACTCCCCCAGTGTGTTCGGCGCGA TCCTGGACCGCAGCGCCGGCCATTTTCGTCTGGGCCCCTACGGTGTTTCGGTGCCTTCGGCGCGACGCTACCTTCCGGGC AGCCTGATCATGGAGACCACCTGGCAGACCCATACCGGCTGGCTGATCGTGCGAGACGCGCTGGTGATGGGTAAATGGCA CGATATCGAACGGCGATCGCGGACCCACCGCCGCACCCCGATGGACTGGGACGCCGAGCACATCCTGTTGCGCACGGTGC GCTGCGTCAGCGGCACCGTTGAACTGATGATGAGCTGCGAGCCGGCGTTCGACTATCACCGCTTGGGCGCCACCTGGGAA TACTCGGCCGAGGCTTACGGCGAGGCCATAGCCCGCGCCAACACGGAGCCCGACGCGCACCCGACGCTGCGGCTGACCAC CAACCTGCGGATCGGGCTGGAGGGCCGGGAAGCACGCGCACGCACCCGGATGAAGGAGGGTGACGACGTGTTCGTCGCGC TGAGCTGGACCAAACACCCGCCGCCGCAGACCTACGACGAGGCCGCCGACAAGATGTGGCAAACCACCGAGTGCTGGCGG CAGTGGATCAACATCGGCAACTTCCCCGACCACCCATGGCGGGCGTACCTGCAGCGCAGCGCGCTAACCCTGAAGGGGTT GACCTACTCCCCCACCGGGGCGCTGCTCGCGGCGAGCACCACGTCGCTGCCGGAAACCCCGCGAGGCGAACGCAACTGGG ACTACCGCTATGCCTGGATTCGCGACTCGACCTTCGCGCTGTGGGGGCTCTACACCCTGGGATTGGACCGGGAAGCCGAC GACTTCTTTGCGTTCATCGCCGACGTGTCCGGCGCCAACAACAACGAACGCCATCCGCTGCAGGTGATGTACGGGGTGGG CGGTGAACGCAGCCTGGTCGAAGCGGAGCTGCACCATTTGTCCGGCTACGATCATGCCCGCCCGGTGCGCATCGGCAACG GCGCCTACAACCAGCGCCAACACGACATCTGGGGTTCGATCCTGGACTCGTTTTACCTGCACGCAAAGTCCCGCGAGCAA GTCCCGGAGAACCTATGGCCGGTGCTGAAGCGGCAGGTGGAAGAGGCCATCAAGCATTGGCGTGAGCCCGACCGGGGAAT CTGGGAGGTGCGCGGCGAGCCGCAACACTTCACGTCGTCGAAGGTGATGTGCTGGGTCGCCTTGGACCGGGGGGCCAAAC TGGCCGAGCGTCAGGGCGAGAAAAGCTACGCCCAGCAGTGGCGGGCCATCGCCGACGAGATCAAGGCCGACATTCTGGAA CACGGGGTGGACTCGCGCGGCGTGTTCACCCAGCGCTACGGCGATGAGGCGTTGGACGCCTCACTGCTGCTGGTGGTGCT GACCCGATTCCTGCCGCCGGACGACCCGCGGGTGCGCAACACCGTGCTGGCCATCGCCGACGAGCTGACCGAGGACGGCC TGGTGTTGAGGTACCGGGTGCATGAGACCGACGACGGGCTTTCCGGCGAGGAAGGCACGTTCACCATCTGCTCGTTTTGG CTGGTATCGGCGCTGGTCGAGATCGGTGAGGTGGGCCGCGCCAAGCGGCTGTGCGAGCGGCTGTTGTCCTTCGCCAGCCC GCTGCTGCTCTACGCGGAGGAGATTGAGCCGCGGAGCGGGCGTCACCTGGGCAACTTCCCGCAGGCGTTCACCCACCTGG CACTGATCAACGCCGTGGTCCACGTGATTCGCGCCGAGGAGGAAGCCGACAGCTCGGGGATGTTTCAGCCCGCCAACGCC CCCATGTAG
Upstream 100 bases:
>100_bases TCAACCCCCCGACCAATCGACCGAAACAGCCCGCGAGGCTAAAGCGTTGGCCGGGGCAACGGACGGGGCAACGGCCACAT CCGCGGATCTGCACGCACCC
Downstream 100 bases:
>100_bases GACTTCCGATGCCGAGCAGACGCAAAATCGCCCAAATTCGGGCCGAAATGGGCGATTTTGCGTCTGCTCGGCAAGCGTCA ACTCAATTCGCTGATCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MALSSSSPLRNPFPPIADYAFLSDWETTCLISPAGSVEWLCVPRPDSPSVFGAILDRSAGHFRLGPYGVSVPSARRYLPG SLIMETTWQTHTGWLIVRDALVMGKWHDIERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRLGATWE YSAEAYGEAIARANTEPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYDEAADKMWQTTECWR QWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPRGERNWDYRYAWIRDSTFALWGLYTLGLDREAD DFFAFIADVSGANNNERHPLQVMYGVGGERSLVEAELHHLSGYDHARPVRIGNGAYNQRQHDIWGSILDSFYLHAKSREQ VPENLWPVLKRQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRAIADEIKADILE HGVDSRGVFTQRYGDEALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTEDGLVLRYRVHETDDGLSGEEGTFTICSFW LVSALVEIGEVGRAKRLCERLLSFASPLLLYAEEIEPRSGRHLGNFPQAFTHLALINAVVHVIRAEEEADSSGMFQPANA PM
Sequences:
>Translated_642_residues MALSSSSPLRNPFPPIADYAFLSDWETTCLISPAGSVEWLCVPRPDSPSVFGAILDRSAGHFRLGPYGVSVPSARRYLPG SLIMETTWQTHTGWLIVRDALVMGKWHDIERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRLGATWE YSAEAYGEAIARANTEPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYDEAADKMWQTTECWR QWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPRGERNWDYRYAWIRDSTFALWGLYTLGLDREAD DFFAFIADVSGANNNERHPLQVMYGVGGERSLVEAELHHLSGYDHARPVRIGNGAYNQRQHDIWGSILDSFYLHAKSREQ VPENLWPVLKRQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRAIADEIKADILE HGVDSRGVFTQRYGDEALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTEDGLVLRYRVHETDDGLSGEEGTFTICSFW LVSALVEIGEVGRAKRLCERLLSFASPLLLYAEEIEPRSGRHLGNFPQAFTHLALINAVVHVIRAEEEADSSGMFQPANA PM >Mature_641_residues ALSSSSPLRNPFPPIADYAFLSDWETTCLISPAGSVEWLCVPRPDSPSVFGAILDRSAGHFRLGPYGVSVPSARRYLPGS LIMETTWQTHTGWLIVRDALVMGKWHDIERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRLGATWEY SAEAYGEAIARANTEPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYDEAADKMWQTTECWRQ WINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPRGERNWDYRYAWIRDSTFALWGLYTLGLDREADD FFAFIADVSGANNNERHPLQVMYGVGGERSLVEAELHHLSGYDHARPVRIGNGAYNQRQHDIWGSILDSFYLHAKSREQV PENLWPVLKRQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRAIADEIKADILEH GVDSRGVFTQRYGDEALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTEDGLVLRYRVHETDDGLSGEEGTFTICSFWL VSALVEIGEVGRAKRLCERLLSFASPLLLYAEEIEPRSGRHLGNFPQAFTHLALINAVVHVIRAEEEADSSGMFQPANAP M
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72735; Mature: 72603
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSSSSPLRNPFPPIADYAFLSDWETTCLISPAGSVEWLCVPRPDSPSVFGAILDRSAG CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCC HFRLGPYGVSVPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGKWHDIERRSRTHRRTP CEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCCC MDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRLGATWEYSAEAYGEAIARANTEPDAH CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECCHHHHHHHHHHCCCCCCCC PTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYDEAADKMWQTTECWR CEEEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH QWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPRGERNWDYRYAWI HHHCCCCCCCCHHHHHHHHHHEEEECCEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEE RDSTFALWGLYTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEAELHHL ECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHC SGYDHARPVRIGNGAYNQRQHDIWGSILDSFYLHAKSREQVPENLWPVLKRQVEEAIKHW CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHH REPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRAIADEIKADILE CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH HGVDSRGVFTQRYGDEALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTEDGLVLRYRV CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE HETDDGLSGEEGTFTICSFWLVSALVEIGEVGRAKRLCERLLSFASPLLLYAEEIEPRSG ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHCCCCCC RHLGNFPQAFTHLALINAVVHVIRAEEEADSSGMFQPANAPM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ALSSSSPLRNPFPPIADYAFLSDWETTCLISPAGSVEWLCVPRPDSPSVFGAILDRSAG CCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCC HFRLGPYGVSVPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGKWHDIERRSRTHRRTP CEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCCC MDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRLGATWEYSAEAYGEAIARANTEPDAH CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECCHHHHHHHHHHCCCCCCCC PTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYDEAADKMWQTTECWR CEEEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH QWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPRGERNWDYRYAWI HHHCCCCCCCCHHHHHHHHHHEEEECCEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEE RDSTFALWGLYTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEAELHHL ECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHC SGYDHARPVRIGNGAYNQRQHDIWGSILDSFYLHAKSREQVPENLWPVLKRQVEEAIKHW CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHH REPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRAIADEIKADILE CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH HGVDSRGVFTQRYGDEALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTEDGLVLRYRV CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE HETDDGLSGEEGTFTICSFWLVSALVEIGEVGRAKRLCERLLSFASPLLLYAEEIEPRSG ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHCCCCCC RHLGNFPQAFTHLALINAVVHVIRAEEEADSSGMFQPANAPM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA