| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is ybeZ [C]
Identifier: 148823571
GI number: 148823571
Start: 2662211
End: 2663269
Strand: Reverse
Name: ybeZ [C]
Synonym: TBFG_12394
Alternate gene names: 148823571
Gene position: 2663269-2662211 (Counterclockwise)
Preceding gene: 148823572
Following gene: 148823570
Centisome position: 60.19
GC content: 64.78
Gene sequence:
>1059_bases GTGACGTCCCGCGAGACCCGCGCTGCTGACGCGGCTGGAGCCCGGCAAGCCGACGCTCAAGTTCGCAGCAGCATCGACGT TCCGCCTGACCTCGTCGTGGGCTTACTCGGTTCGGCCGATGAAAATCTGCGTGCCCTCGAACGCACGCTGAGTGCCGACC TGCACGTGCGCGGCAACGCGGTGACCCTCTGCGGTGAGCCGGCGGATGTCGCGCTAGCCGAACGGGTGATCTCCGAACTG ATTGCGATCGTGGCCAGCGGCCAGTCGCTGACCCCAGAGGTAGTGCGCCACAGCGTTGCCATGCTGGTCGGCACAGGCAA CGAGTCACCGGCCGAAGTGCTCACTCTAGACATTTTGTCGCGTCGGGGGAAGACGATCCGGCCCAAGACGCTCAACCAGA AACGCTACGTGGACGCGATCGACGCCAACACCATCGTCTTCGGAATCGGCCCGGCCGGCACCGGAAAGACCTATCTTGCG ATGGCCAAAGCGGTCCACGCGCTGCAGACCAAGCAGGTGACCCGCATAATCTTGACCCGACCCGCGGTGGAAGCCGGTGA ACGCCTTGGATTTCTGCCGGGCACGCTGAGCGAAAAGATCGATCCGTACCTACGACCGCTCTATGACGCGCTGTACGACA TGATGGACCCCGAGCTGATCCCGAAGCTGATGTCCGCTGGAGTCATCGAGGTGGCACCGCTGGCGTACATGCGGGGTAGA ACCCTGAATGACGCGTTCATCGTCCTGGACGAGGCGCAGAACACCACGGCCGAGCAGATGAAGATGTTCCTCACCCGCCT GGGCTTCGGATCCAAGGTCGTGGTCACCGGAGATGTCACCCAGATCGACCTGCCGGGCGGCGCCCGGTCGGGTCTGCGGG CGGCGGTCGACATCCTCGAAGACATCGACGACATCCATATCGCGGAGCTGACCAGCGTGGATGTGGTACGCCACCGTCTG GTCTCGGAGATCGTGGACGCTTATGCGCGGTACGAGGAGCCCGGGTCGGGGCTGAATCGGGCGGCTCGGCGGGCGTCCGG CGCCCGCGGTCGCCGATGA
Upstream 100 bases:
>100_bases GCTCCGACGCCGTCCCTGACCGGCGTTAGAATGAAACTTCAACACTCGTCAGTTCGACAGGTTCCAGTCGATAGGCCAGA AAGCAGGCATCAGAAGCCAG
Downstream 100 bases:
>100_bases TGGGTGCGTGAGCATCTTATGAGCATCGAGGTAGCCAACGAGTCAGGCATCGACGTCTCGGAAGCGGAACTAGTCAGTGT CGCACGGTTTGTCATCGCCA
Product: phoH-like protein phoH1 (phosphate starvation-inducible protein psiH)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTSRETRAADAAGARQADAQVRSSIDVPPDLVVGLLGSADENLRALERTLSADLHVRGNAVTLCGEPADVALAERVISEL IAIVASGQSLTPEVVRHSVAMLVGTGNESPAEVLTLDILSRRGKTIRPKTLNQKRYVDAIDANTIVFGIGPAGTGKTYLA MAKAVHALQTKQVTRIILTRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPELIPKLMSAGVIEVAPLAYMRGR TLNDAFIVLDEAQNTTAEQMKMFLTRLGFGSKVVVTGDVTQIDLPGGARSGLRAAVDILEDIDDIHIAELTSVDVVRHRL VSEIVDAYARYEEPGSGLNRAARRASGARGRR
Sequences:
>Translated_352_residues MTSRETRAADAAGARQADAQVRSSIDVPPDLVVGLLGSADENLRALERTLSADLHVRGNAVTLCGEPADVALAERVISEL IAIVASGQSLTPEVVRHSVAMLVGTGNESPAEVLTLDILSRRGKTIRPKTLNQKRYVDAIDANTIVFGIGPAGTGKTYLA MAKAVHALQTKQVTRIILTRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPELIPKLMSAGVIEVAPLAYMRGR TLNDAFIVLDEAQNTTAEQMKMFLTRLGFGSKVVVTGDVTQIDLPGGARSGLRAAVDILEDIDDIHIAELTSVDVVRHRL VSEIVDAYARYEEPGSGLNRAARRASGARGRR >Mature_351_residues TSRETRAADAAGARQADAQVRSSIDVPPDLVVGLLGSADENLRALERTLSADLHVRGNAVTLCGEPADVALAERVISELI AIVASGQSLTPEVVRHSVAMLVGTGNESPAEVLTLDILSRRGKTIRPKTLNQKRYVDAIDANTIVFGIGPAGTGKTYLAM AKAVHALQTKQVTRIILTRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPELIPKLMSAGVIEVAPLAYMRGRT LNDAFIVLDEAQNTTAEQMKMFLTRLGFGSKVVVTGDVTQIDLPGGARSGLRAAVDILEDIDDIHIAELTSVDVVRHRLV SEIVDAYARYEEPGSGLNRAARRASGARGRR
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family
Homologues:
Organism=Escherichia coli, GI145693103, Length=309, Percent_Identity=51.4563106796116, Blast_Score=297, Evalue=7e-82, Organism=Escherichia coli, GI1787257, Length=234, Percent_Identity=43.5897435897436, Blast_Score=188, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHOL_MYCBO (P0A5S1)
Other databases:
- EMBL: BX248342 - RefSeq: NP_856038.1 - ProteinModelPortal: P0A5S1 - SMR: P0A5S1 - EnsemblBacteria: EBMYCT00000015348 - GeneID: 1094377 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2389c - GeneTree: EBGT00050000014652 - HOGENOM: HBG649137 - OMA: VRHKLVG - ProtClustDB: CLSK799361 - BioCyc: MBOV233413:MB2389C-MONOMER - GO: GO:0005737 - InterPro: IPR004087 - InterPro: IPR003714 - SMART: SM00322
Pfam domain/function: PF02562 PhoH
EC number: NA
Molecular weight: Translated: 37800; Mature: 37669
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRETRAADAAGARQADAQVRSSIDVPPDLVVGLLGSADENLRALERTLSADLHVRGNA CCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCE VTLCGEPADVALAERVISELIAIVASGQSLTPEVVRHSVAMLVGTGNESPAEVLTLDILS EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHH RRGKTIRPKTLNQKRYVDAIDANTIVFGIGPAGTGKTYLAMAKAVHALQTKQVTRIILTR HCCCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPELIPKLMSAGVIEVAPLAYMRGR CCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCC TLNDAFIVLDEAQNTTAEQMKMFLTRLGFGSKVVVTGDVTQIDLPGGARSGLRAAVDILE CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHH DIDDIHIAELTSVDVVRHRLVSEIVDAYARYEEPGSGLNRAARRASGARGRR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TSRETRAADAAGARQADAQVRSSIDVPPDLVVGLLGSADENLRALERTLSADLHVRGNA CCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCE VTLCGEPADVALAERVISELIAIVASGQSLTPEVVRHSVAMLVGTGNESPAEVLTLDILS EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHH RRGKTIRPKTLNQKRYVDAIDANTIVFGIGPAGTGKTYLAMAKAVHALQTKQVTRIILTR HCCCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPELIPKLMSAGVIEVAPLAYMRGR CCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCC TLNDAFIVLDEAQNTTAEQMKMFLTRLGFGSKVVVTGDVTQIDLPGGARSGLRAAVDILE CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHH DIDDIHIAELTSVDVVRHRLVSEIVDAYARYEEPGSGLNRAARRASGARGRR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972