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The map label for this gene is recO

Identifier: 148823565

GI number: 148823565

Start: 2656756

End: 2657553

Strand: Reverse

Name: recO

Synonym: TBFG_12388

Alternate gene names: 148823565

Gene position: 2657553-2656756 (Counterclockwise)

Preceding gene: 148823567

Following gene: 148823564

Centisome position: 60.07

GC content: 68.8

Gene sequence:

>798_bases
ATGCGGCTGTATCGGGACCGGGCTGTTGTGCTGCGCCAGCACAAGCTCGGCGAAGCCGACCGGATCGTCACCCTGCTGAC
CCGCGATCACGGGTTGGTCCGCGCGGTGGCCAAAGGTGTTCGACGCACCCGCAGCAAATTCGGCGCGCGCCTGGAGCCGT
TCGCGCATATCGAGGTGCAACTGCACCCTGGCCGCAACCTCGACATCGTCACCCAGGTTGTCTCTGTCGACGCGTTCGCC
ACCGACATCGTCGCCGATTACGGCCGCTACACCTGCGGATGCGCGATACTGGAAACCGCCGAACGCCTGGCCGGTGAGGA
GCGGGCGCCCGCTCCGGCTCTGCACCGGCTCACGGTGGGCGCGCTGCGGGCGGTGGCCGATGGACAGCGGCCTCGGGACC
TGTTGTTGGACGCCTATCTGCTGCGCGCCATGGGCATCGCCGGCTGGGCACCAGCGTTGACCGAGTGCGCCCGCTGCGCC
ACGCCTGGTCCGCATCGGGCGTTTCACATCGCGACCGGGGGCAGTGTCTGCGCACACTGCCGTCCGGCCGGCTCGACCAC
ACCGCCGCTGGGCGTCGTAGACCTGATGTCCGCGCTGTACGACGGCGATTGGGAGGCCGCCGAGGCGGCGCCGCAATCGG
CCCGCAGCCATGTCAGCGGGTTGGTGGCCGCACACCTGCAATGGCATCTGGAACGGCAGCTGAAAACGTTGCCGCTGGTG
GAGCGGTTCTACCAGGCCGATCGATCGGTTGCCGAACGTCGCGCCGCGCTGATCGGGCAGGATATAGCCGGTGGCTAG

Upstream 100 bases:

>100_bases
GGAAATGGCTCCAGCATCCGACCCAGAAGCGCCAACCACGGGGTACGAGACTATCGGCGCGGATACCCGCGATGTCGTGG
CGGGGTGCAAAACTATTGTG

Downstream 100 bases:

>100_bases
GGATGCACGGAAGCGGACGTCCAGCAACTTCCCGCAGCTGCCTCCGGCCCCCGACGACTACCCGACCTTTCCTGATACGT
CGACGTGGCCCGTCGTCTTC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHPGRNLDIVTQVVSVDAFA
TDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHIATGGSVCAHCRPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV
ERFYQADRSVAERRAALIGQDIAGG

Sequences:

>Translated_265_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHPGRNLDIVTQVVSVDAFA
TDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHIATGGSVCAHCRPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV
ERFYQADRSVAERRAALIGQDIAGG
>Mature_265_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHPGRNLDIVTQVVSVDAFA
TDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHIATGGSVCAHCRPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV
ERFYQADRSVAERRAALIGQDIAGG

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_MYCBO (P65984)

Other databases:

- EMBL:   BX248342
- RefSeq:   NP_856032.1
- ProteinModelPortal:   P65984
- SMR:   P65984
- EnsemblBacteria:   EBMYCT00000015866
- GeneID:   1094371
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb2383c
- GeneTree:   EBGT00050000016913
- HOGENOM:   HBG634481
- OMA:   WHLERGL
- ProtClustDB:   PRK00085
- BioCyc:   MBOV233413:MB2383C-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28724; Mature: 28724

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ
CCCCHHHHHHHHHHCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEECC
RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERFYQADRSVAERRAALIGQDIAGG
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ
CCCCHHHHHHHHHHCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEECC
RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERFYQADRSVAERRAALIGQDIAGG
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972