| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823547
Identifier: 148823547
GI number: 148823547
Start: 2636685
End: 2636969
Strand: Reverse
Name: 148823547
Synonym: TBFG_12370
Alternate gene names: NA
Gene position: 2636969-2636685 (Counterclockwise)
Preceding gene: 148823548
Following gene: 148823545
Centisome position: 59.6
GC content: 63.16
Gene sequence:
>285_bases ATGACCATCAACTATCAGTTCGGTGATGTCGACGCTCATGGCGCCATGATCCGCGCTCAGGCCGGGTTGCTGGAGGCGGA GCATCAGGCCATCGTTCGTGATGTGTTGGCCGCGGGTGACTTTTGGGGCGGCGCCGGTTCGGTGGCTTGCCAGGAGTTCA TCACCCAGCTGGGCCGTAACTTCCAGGTGATCTACGAGCAGGCCAACGCCCACGGGCAGAAGGTGCAGGCTGCCGGCAAC AACATGGCACAAACCGACAGCGCCGTCGGCTCCAGCTGGGCCTGA
Upstream 100 bases:
>100_bases ACAACTACGAGCAGCAAGAGCAGGCCTCCCAGCAGATCCTCAGCAGCTAACGTCAGCCGCTGCAGCACAATACTTTTACA AGCGAAGGAGAACAGGTTCG
Downstream 100 bases:
>100_bases CAGGGTCGACGAACCCTAGGAAGAAGCCTAGGTCGACGGCCACACGCGCCAGCGTACGGGTATCCCCGTGCGCTGGCGCG TGGCTTAGAACCGCCCGCCG
Product: Esat-6 like protein esxO (Esat-6 like protein 6)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTINYQFGDVDAHGAMIRAQAGLLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRNFQVIYEQANAHGQKVQAAGN NMAQTDSAVGSSWA
Sequences:
>Translated_94_residues MTINYQFGDVDAHGAMIRAQAGLLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRNFQVIYEQANAHGQKVQAAGN NMAQTDSAVGSSWA >Mature_93_residues TINYQFGDVDAHGAMIRAQAGLLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRNFQVIYEQANAHGQKVQAAGNN MAQTDSAVGSSWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ESAT-6 (esx) family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ES6L6_MYCTU (P95242)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: C70662 - RefSeq: NP_216862.1 - RefSeq: NP_336890.1 - PDB: 3OGI - PDBsum: 3OGI - EnsemblBacteria: EBMYCT00000003937 - EnsemblBacteria: EBMYCT00000069038 - GeneID: 888956 - GeneID: 926392 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2411 - KEGG: mtu:Rv2346c - TIGR: MT2411 - TubercuList: Rv2346c - GeneTree: EBGT00050000017993 - HOGENOM: HBG569450 - OMA: ACQEFIS - ProtClustDB: CLSK790909 - InterPro: IPR009416 - InterPro: IPR010310 - PIRSF: PIRSF037656
Pfam domain/function: PF06013 WXG100
EC number: NA
Molecular weight: Translated: 9954; Mature: 9823
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINYQFGDVDAHGAMIRAQAGLLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRN CEECCCCCCCCCCCCEEHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC FQVIYEQANAHGQKVQAAGNNMAQTDSAVGSSWA CEEEHHHHCCCCCEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TINYQFGDVDAHGAMIRAQAGLLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRN EECCCCCCCCCCCCEEHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC FQVIYEQANAHGQKVQAAGNNMAQTDSAVGSSWA CEEEHHHHCCCCCEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036