| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823518
Identifier: 148823518
GI number: 148823518
Start: 2601306
End: 2602628
Strand: Direct
Name: 148823518
Synonym: TBFG_12341
Alternate gene names: NA
Gene position: 2601306-2602628 (Clockwise)
Preceding gene: 148823517
Following gene: 148823524
Centisome position: 58.79
GC content: 65.0
Gene sequence:
>1323_bases GTGACCCGGCCCCGCCAGTCCACGCTGGTCGCCACCGCCCTTGTGCTGGTGGCGATCCTGCTGGGTGTGACGGCGGTGCT ATTGGGGCTCTCCGCCGAACCGCGTGGCGGAAAGATCGTCGTAACGGTGCGACTCTGGGACGAGCCGATTGCTGCGGCGT ATCGACAGTCGTTTGCGGCATTCACCCGCAGCCATCCCGATATCGAGGTGCGCACCAATCTGGTGGCCTATTCGACCTAC TTCGAAACCCTGCGCACCGACGTGGCTGGCGGCAGCGCGGACGACATCTTCTGGCTATCCAACGCCTACTTCGCCGCCTA CGCTGACAGTGGCCGGCTAATGAAGATTCAGACCGATGCCGCCGACTGGGAGCCGGCGGTGGTTGACCAGTTCACTCGGT CCGGCGTCTTGTGGGGTGTGCCGCAACTGACGGACGCCGGAATTGCCGTGTTCTACAACGCCGATCTGCTGGCTGCCGCC GGTGTCGACCCCACGCAGGTGGACAACTTGCGATGGAGTCGCGGCGATGACGACACCTTGCGCCCGATGCTGGCTAGGCT CACCGTCGACGCCGATGGACGCACCGCCAACACGCCAGGATTCGATGCTCGGCGGGTCCGCCAGTGGGGATACAACGCCG CCAACGATCCTCAGGCCATCTACCTTAACTACATCGGCTCGGCCGGCGGTGTGTTCCAGCGCGACGGCAAGTTCGCGTTC GATAACCCCGGCGCCATCGAAGCCTTCCGCTATCTGGTCGGCCTGATCAACGACGACCACGTCGCACCGCCGGCCTCGGA CACCAACGACAACGGCGATTTCTCCCGTAACCAGTTTCTGGCTGGCAAGATGGCGCTATTCCAGTCCGGCACCTACAGTT TGGCGCCGGTAGCCCGTGACGCCCTCTTCCACTGGGGTGTGGCGATGCTTCCCGCCGGCCCCGCAGGCCGGGTAAGCGTC ACCAATGGTATTGCTGCAGCTGGTAATTCGGCGTCCAAACATCCGGATGCGGTGCGTCAGGTGCTGGCCTGGATGGGCAG CACGGAGGGCAACTCCTACCTGGGCCGCCACGGTGCGGCCATCCCCGCGGTGTTGTCTGCGCAACCGGTCTACTTCGACT ACTGGTCTGCTAGGGGCGTCGATGTCACGCCGTTCTTCGCGGTGTTGAACGGTCCGCGCATTGCGGCCCCCGGCGGCGCC GGCTTCGCCGCCGGACAGCAGGCCCTCGAACCCTACTTCGACGAAATGTTCCTCGGCCGTGGCGATGTCACGACAACCCT GAGGCAGGCACAGGCGGCGGCCAATGCTGCCACACAGCGCTAG
Upstream 100 bases:
>100_bases TGGTGATGGCGGCGACCACGGTGGCAATCGTGCCGCTGATTGCGCTCTTCGTGACCTTCCAGCGGCACATCGTCGCATCG ATTGTGGTCTCGGGGCTCAA
Downstream 100 bases:
>100_bases TTGCGATCTAGCCCGGTAGTACTAGCACGGGGACCGGGCTGTAGCGAATGATCTTGCCACTCCAGGAGCCGAGGAATACT CTCGCGACATCACCGAACGG
Product: periplasmic sugar-binding lipoprotein uspC
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter; ABC Transporter; Sugar Transport System; ABC-Type Sugar Transport System; ABC-Type Sugar Transport Systems Permease Component
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTRPRQSTLVATALVLVAILLGVTAVLLGLSAEPRGGKIVVTVRLWDEPIAAAYRQSFAAFTRSHPDIEVRTNLVAYSTY FETLRTDVAGGSADDIFWLSNAYFAAYADSGRLMKIQTDAADWEPAVVDQFTRSGVLWGVPQLTDAGIAVFYNADLLAAA GVDPTQVDNLRWSRGDDDTLRPMLARLTVDADGRTANTPGFDARRVRQWGYNAANDPQAIYLNYIGSAGGVFQRDGKFAF DNPGAIEAFRYLVGLINDDHVAPPASDTNDNGDFSRNQFLAGKMALFQSGTYSLAPVARDALFHWGVAMLPAGPAGRVSV TNGIAAAGNSASKHPDAVRQVLAWMGSTEGNSYLGRHGAAIPAVLSAQPVYFDYWSARGVDVTPFFAVLNGPRIAAPGGA GFAAGQQALEPYFDEMFLGRGDVTTTLRQAQAAANAATQR
Sequences:
>Translated_440_residues MTRPRQSTLVATALVLVAILLGVTAVLLGLSAEPRGGKIVVTVRLWDEPIAAAYRQSFAAFTRSHPDIEVRTNLVAYSTY FETLRTDVAGGSADDIFWLSNAYFAAYADSGRLMKIQTDAADWEPAVVDQFTRSGVLWGVPQLTDAGIAVFYNADLLAAA GVDPTQVDNLRWSRGDDDTLRPMLARLTVDADGRTANTPGFDARRVRQWGYNAANDPQAIYLNYIGSAGGVFQRDGKFAF DNPGAIEAFRYLVGLINDDHVAPPASDTNDNGDFSRNQFLAGKMALFQSGTYSLAPVARDALFHWGVAMLPAGPAGRVSV TNGIAAAGNSASKHPDAVRQVLAWMGSTEGNSYLGRHGAAIPAVLSAQPVYFDYWSARGVDVTPFFAVLNGPRIAAPGGA GFAAGQQALEPYFDEMFLGRGDVTTTLRQAQAAANAATQR >Mature_439_residues TRPRQSTLVATALVLVAILLGVTAVLLGLSAEPRGGKIVVTVRLWDEPIAAAYRQSFAAFTRSHPDIEVRTNLVAYSTYF ETLRTDVAGGSADDIFWLSNAYFAAYADSGRLMKIQTDAADWEPAVVDQFTRSGVLWGVPQLTDAGIAVFYNADLLAAAG VDPTQVDNLRWSRGDDDTLRPMLARLTVDADGRTANTPGFDARRVRQWGYNAANDPQAIYLNYIGSAGGVFQRDGKFAFD NPGAIEAFRYLVGLINDDHVAPPASDTNDNGDFSRNQFLAGKMALFQSGTYSLAPVARDALFHWGVAMLPAGPAGRVSVT NGIAAAGNSASKHPDAVRQVLAWMGSTEGNSYLGRHGAAIPAVLSAQPVYFDYWSARGVDVTPFFAVLNGPRIAAPGGAG FAAGQQALEPYFDEMFLGRGDVTTTLRQAQAAANAATQR
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47023; Mature: 46892
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPRQSTLVATALVLVAILLGVTAVLLGLSAEPRGGKIVVTVRLWDEPIAAAYRQSFAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH FTRSHPDIEVRTNLVAYSTYFETLRTDVAGGSADDIFWLSNAYFAAYADSGRLMKIQTDA HHCCCCCEEEEEEEEEHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCEEEEECCC ADWEPAVVDQFTRSGVLWGVPQLTDAGIAVFYNADLLAAAGVDPTQVDNLRWSRGDDDTL CCCCHHHHHHHHHCCEEECCCCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCCCHHH RPMLARLTVDADGRTANTPGFDARRVRQWGYNAANDPQAIYLNYIGSAGGVFQRDGKFAF HHHHHHEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCEEC DNPGAIEAFRYLVGLINDDHVAPPASDTNDNGDFSRNQFLAGKMALFQSGTYSLAPVARD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH ALFHWGVAMLPAGPAGRVSVTNGIAAAGNSASKHPDAVRQVLAWMGSTEGNSYLGRHGAA HHHHCCHHEECCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC IPAVLSAQPVYFDYWSARGVDVTPFFAVLNGPRIAAPGGAGFAAGQQALEPYFDEMFLGR CCHHHCCCCEEEECCCCCCCCCCHHHHEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCC GDVTTTLRQAQAAANAATQR CCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRPRQSTLVATALVLVAILLGVTAVLLGLSAEPRGGKIVVTVRLWDEPIAAAYRQSFAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH FTRSHPDIEVRTNLVAYSTYFETLRTDVAGGSADDIFWLSNAYFAAYADSGRLMKIQTDA HHCCCCCEEEEEEEEEHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCEEEEECCC ADWEPAVVDQFTRSGVLWGVPQLTDAGIAVFYNADLLAAAGVDPTQVDNLRWSRGDDDTL CCCCHHHHHHHHHCCEEECCCCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCCCHHH RPMLARLTVDADGRTANTPGFDARRVRQWGYNAANDPQAIYLNYIGSAGGVFQRDGKFAF HHHHHHEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCEEC DNPGAIEAFRYLVGLINDDHVAPPASDTNDNGDFSRNQFLAGKMALFQSGTYSLAPVARD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH ALFHWGVAMLPAGPAGRVSVTNGIAAAGNSASKHPDAVRQVLAWMGSTEGNSYLGRHGAA HHHHCCHHEECCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC IPAVLSAQPVYFDYWSARGVDVTPFFAVLNGPRIAAPGGAGFAAGQQALEPYFDEMFLGR CCHHHCCCCEEEECCCCCCCCCCHHHHEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCC GDVTTTLRQAQAAANAATQR CCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA