| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823504
Identifier: 148823504
GI number: 148823504
Start: 2586597
End: 2587886
Strand: Direct
Name: 148823504
Synonym: TBFG_12327
Alternate gene names: NA
Gene position: 2586597-2587886 (Clockwise)
Preceding gene: 148823502
Following gene: 148823509
Centisome position: 58.46
GC content: 67.44
Gene sequence:
>1290_bases ATGACCCAAACGCTGCGCCTTACCGCGCTGGACGAGATGTTCATCACCGATGACATTGACATCGTTCCTTCGGTGCAGAT CGAGGCGCGGGTGTCCGGTCGTTTCGACCTCGACCGGCTTGCCGCTGCCCTGCGCGCCGCCGTCGCCAAGCACGCCCTGG CTCGGGCGCGGCTTGGCCGCGCCAGCCTAACCGCACGGACGCTGTATTGGGAGGTACCCGACCGCGCGGATCACCTCGCC GTGGAGATCACCGATGAACCCGTCGGTGAAGTTCGCAGTCGCTTTTATGCGCGGGCTCCCGAACTGCACCGAAGCCCGGT CTTTGCCGTCGCGGTGGTACGCGAGACCGTGGGCGACCGCCTCCTGCTCAACTTCCACCACGCGGCCTTCGACGGCATGG GCGGGCTGCGTCTGTTGCTCTCACTGGCCCGGGCCTATGCGGGCGAGCCTGACGAGGTCGGTGGCCCTCCGATCGAGGAA GCCCGCAACCTTAAAGGCGTCGCCGGCTCCCGCGACCTGTTCGACGTCCTGATCCGCGCCCGCGGCCTGGCAAAACCGGC CATCGACCGGAAGCGGACCACCCGGGTCGCCCCGGATGGCGGCTCGCCCGACGGGCCGCGCTTCGTGTTCGCCCCACTCA CCATCGAGAGCGACGAGATGGCAACCGCGGTTGCTCGTCGACCCGAGGGGGCGACGGTGAACGACCTGGCGATGGCCGCG CTGGCGTTGACGATCCTGCAGTGGAACCGCACACACGATGTCCCAGCCGCCGATTCCGTGTCGGTGAACATGCCGGTGAA CTTCCGGCCGACCGCGTGGTCGACCGAGGTCATCTCGAACTTTGCCAGCTACCTGGCGATCGTGCTGCGGGTCGACGAGG TGACCGATCTCGAGAAGGCGACCGCCATCGTCGCCGGGATCACCGGACCATTGAAGCAATCCGGCGCCGCCGGGTGGGTC GTGGATCTGCTCGAAGGGGGAAAGGTGTTGCCGGCGATGCTCAAGCGCCAACTTCAGCTGCTTCTCCCCTTGGTCGAAGA TCGGTTCGTCGAAAGCGTCTGTCTGTCCAACCTGGGCCGCGTCGACGTCCCCGCTTTCGGGGGCGAGGCCGGGGACACCA CTGAGGTGTGGTTCAGTCCGACGGCGGCCATGAGCGTCATGCCGATCGGGGTTGGCCTCGTCGGCTTCGGAGGAACGCTG CGCGCCATGTTCCGCGGCGACGGGCGAACCATCGGCGGCGAGGCGCTGGGCCGCTTCGCCGCACTGTATCGCGACACACT GCTGACCTGA
Upstream 100 bases:
>100_bases AGCGCCGGCAACGGATGGTCGGCGAGGGCGCTGATCGGGCAACGATGCCCAGGCCAGGCGGCCCCAGCGAACGCCGCACC GGCTGGAGGAAGATAGCCCC
Downstream 100 bases:
>100_bases GGGCCCGGCATGACCGACAACGAGTGCCCGGCCGACAGCCGACGGCGCCATGTCCTGCGGCTCGCCCTGTTCGCCGGGAT TTTGCTGGGGCTGTTCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLA VEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEE ARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWV VDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTL RAMFRGDGRTIGGEALGRFAALYRDTLLT
Sequences:
>Translated_429_residues MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLA VEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEE ARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWV VDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTL RAMFRGDGRTIGGEALGRFAALYRDTLLT >Mature_428_residues TQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAV EITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEA RNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAAL ALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVV DLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLR AMFRGDGRTIGGEALGRFAALYRDTLLT
Specific function: Unknown
COG id: COG4908
COG function: function code R; Uncharacterized protein containing a NRPS condensation (elongation) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2305_MYCTU (Q50660)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: E70734 - RefSeq: NP_216821.1 - RefSeq: NP_336834.1 - ProteinModelPortal: Q50660 - EnsemblBacteria: EBMYCT00000003014 - EnsemblBacteria: EBMYCT00000069074 - GeneID: 885752 - GeneID: 924058 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2362 - KEGG: mtu:Rv2305 - TIGR: MT2362 - TubercuList: Rv2305 - GeneTree: EBGT00050000018654 - HOGENOM: HBG131024 - OMA: HLALRWS - ProtClustDB: CLSK791767 - InterPro: IPR001242
Pfam domain/function: PF00668 Condensation
EC number: NA
Molecular weight: Translated: 46125; Mature: 45993
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR CCCEEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR HHEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCE LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA EEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHH RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA HCCCCCCCCCHHCCEECCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHH LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR HHHHHCCCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA CCCCCCCCCCCCCCEEEECCCHHHEEEECCCEEECCCHHHHHEECCCCCEECHHHHHHHH ALYRDTLLT HHHHHHHCC >Mature Secondary Structure TQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR CCEEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR HHEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCE LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA EEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHH RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA HCCCCCCCCCHHCCEECCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHH LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR HHHHHCCCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA CCCCCCCCCCCCCCEEEECCCHHHEEEECCCEEECCCHHHHHEECCCCCEECHHHHHHHH ALYRDTLLT HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036