| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823487
Identifier: 148823487
GI number: 148823487
Start: 2569665
End: 2570357
Strand: Reverse
Name: 148823487
Synonym: TBFG_12308
Alternate gene names: NA
Gene position: 2570357-2569665 (Counterclockwise)
Preceding gene: 148823492
Following gene: 148823484
Centisome position: 58.09
GC content: 62.77
Gene sequence:
>693_bases ATGACCACCGTGGATTTCCACTTTGACCCTTTGTGCCCGTTCGCCTATCAGACCTCGGTGTGGATCCGTGATGTGCGCGC GCAATTGGGAATCACGATCAACTGGCGGTTTTTCAGCCTCGAGGAGATCAACCTGGTAGCGGGCAAGAAGCACCCGTGGG AGCGAGACTGGTCCTATGGCTGGTCGTTGATGCGGATCGGTGCGCTGCTGCGTCGAACGAACATGTCGTTGCTTGATCGG TGGTATGCAGCGATCGGTCATGAGCTGCACACCCTGGGCGGCAAACCGCATGATCCCGCGGTGGCGCGACGCCTACTGTG CGACGTCGGCGTCAATGCGGCGATTTTGGACGCGGCGCTGGATGATCCGACGACCCACGACGACGTCCGCGCCGACCACC AACGGGTTGTCGCCGCGGGCGGATACGGCGTGCCGACGCTCTTTTTGGACGGACAATGCCTTTTTGGGCCGGTGCTGGTG GACCCGCCTGCTGGACCGGCCGCCCTGAACCTGTGGAGCGTCGTCACGGGCATGGCGGGGCTGCCGCACGTCTACGAACT TCAGCGACCGAAGTCACCAGCCGATGTTGAACTCATTGCCCAGCAGCTACGCCCCTACCTCGATGGGCGCGATTGGGTGA GCATCAATCGCGGGGAGATCGTTGATATCGACCGGCTGGCGGGCCGCTCCTGA
Upstream 100 bases:
>100_bases AACACCGCGAGATGTTGGGTCGACTCAGTCCGCTGACAACGTGGCGCACGGCACAATGTCATCGAGGTGTCGACTCGATC AGCTGGAGGACTCAGGTCTG
Downstream 100 bases:
>100_bases GCGGCTACACCGTGGTGATTGGCGGGTACTGCCGGCGATGGGCGGAGCGTTGTCGTCGTTTGGTCGCTATGGCAAGGCGG CGGTCTCGAGTTCCTCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTTVDFHFDPLCPFAYQTSVWIRDVRAQLGITINWRFFSLEEINLVAGKKHPWERDWSYGWSLMRIGALLRRTNMSLLDR WYAAIGHELHTLGGKPHDPAVARRLLCDVGVNAAILDAALDDPTTHDDVRADHQRVVAAGGYGVPTLFLDGQCLFGPVLV DPPAGPAALNLWSVVTGMAGLPHVYELQRPKSPADVELIAQQLRPYLDGRDWVSINRGEIVDIDRLAGRS
Sequences:
>Translated_230_residues MTTVDFHFDPLCPFAYQTSVWIRDVRAQLGITINWRFFSLEEINLVAGKKHPWERDWSYGWSLMRIGALLRRTNMSLLDR WYAAIGHELHTLGGKPHDPAVARRLLCDVGVNAAILDAALDDPTTHDDVRADHQRVVAAGGYGVPTLFLDGQCLFGPVLV DPPAGPAALNLWSVVTGMAGLPHVYELQRPKSPADVELIAQQLRPYLDGRDWVSINRGEIVDIDRLAGRS >Mature_229_residues TTVDFHFDPLCPFAYQTSVWIRDVRAQLGITINWRFFSLEEINLVAGKKHPWERDWSYGWSLMRIGALLRRTNMSLLDRW YAAIGHELHTLGGKPHDPAVARRLLCDVGVNAAILDAALDDPTTHDDVRADHQRVVAAGGYGVPTLFLDGQCLFGPVLVD PPAGPAALNLWSVVTGMAGLPHVYELQRPKSPADVELIAQQLRPYLDGRDWVSINRGEIVDIDRLAGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2286_MYCTU (Q50679)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: B70732 - RefSeq: NP_216802.1 - RefSeq: NP_336814.1 - ProteinModelPortal: Q50679 - EnsemblBacteria: EBMYCT00000001453 - EnsemblBacteria: EBMYCT00000072697 - GeneID: 887395 - GeneID: 924079 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2344 - KEGG: mtu:Rv2286c - TIGR: MT2344 - TubercuList: Rv2286c - GeneTree: EBGT00050000017013 - HOGENOM: HBG569416 - OMA: GHELHVL - ProtClustDB: CLSK791752 - InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 - Gene3D: G3DSA:3.40.30.10
Pfam domain/function: PF01323 DSBA; SSF52833 Thiordxn-like_fd
EC number: NA
Molecular weight: Translated: 25643; Mature: 25511
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVDFHFDPLCPFAYQTSVWIRDVRAQLGITINWRFFSLEEINLVAGKKHPWERDWSYG CCEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEECCCCCCCCCHHHH WSLMRIGALLRRTNMSLLDRWYAAIGHELHTLGGKPHDPAVARRLLCDVGVNAAILDAAL HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHC DDPTTHDDVRADHQRVVAAGGYGVPTLFLDGQCLFGPVLVDPPAGPAALNLWSVVTGMAG CCCCCCCHHHHCCCEEEEECCCCCCEEEECCCEEECCEEECCCCCHHHHHHHHHHHHHCC LPHVYELQRPKSPADVELIAQQLRPYLDGRDWVSINRGEIVDIDRLAGRS CCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEHHHHCCCC >Mature Secondary Structure TTVDFHFDPLCPFAYQTSVWIRDVRAQLGITINWRFFSLEEINLVAGKKHPWERDWSYG CEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEECCCCCCCCCHHHH WSLMRIGALLRRTNMSLLDRWYAAIGHELHTLGGKPHDPAVARRLLCDVGVNAAILDAAL HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHC DDPTTHDDVRADHQRVVAAGGYGVPTLFLDGQCLFGPVLVDPPAGPAALNLWSVVTGMAG CCCCCCCHHHHCCCEEEEECCCCCCEEEECCCEEECCEEECCCCCHHHHHHHHHHHHHCC LPHVYELQRPKSPADVELIAQQLRPYLDGRDWVSINRGEIVDIDRLAGRS CCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036