Click here to switch to the map view.

The map label for this gene is 148823478

Identifier: 148823478

GI number: 148823478

Start: 2558248

End: 2558577

Strand: Direct

Name: 148823478

Synonym: TBFG_12299

Alternate gene names: NA

Gene position: 2558248-2558577 (Clockwise)

Preceding gene: 148823477

Following gene: 148823479

Centisome position: 57.82

GC content: 66.36

Gene sequence:

>330_bases
GTGAACCGTCACTCGACGGCAGCGAGCGATCGCGGGCTGCAGGCCGAACGGACGACGCTGGCCTGGACCCGGACGGCCTT
TGCGTTGCTGGTCAACGGCGTGTTGCTGACGCTCAAGGACACGCAAGGCGCCGACGGGCCGGCTGGGCTGATCCCGGCCG
GCCTAGCTGGTGCTGCGGCCTCGTGCTGCTATGTGATCGCTCTACAACGCCAACGAGCACTTTCGCACCGCCCGCTACCG
GCACGAATCACTCCCCGTGGCCAGGTCCACATCCTCGCGACAGCGGTGCTGGTGCTTATGGTCGTCACCGCCTTTGCTCA
ACTGCTCTAG

Upstream 100 bases:

>100_bases
TGCCATTGCCCCGTCACCCCACACCGGGCTACCTCGCGGTGGGGCTCTGCGTGGTCGGGGTCGTCGCGCTCGCATTGGTG
GTAGCCAAGGCGATCACCGG

Downstream 100 bases:

>100_bases
CGCGGCGAACAGACGCAAAAGCCCCCGCACGCACGGAGTGTCGGGGGCTTTTGCGTCTACTCGCCAAATGCGATCGTGGC
CGATGGCGGCGCGGACCTTC

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAASCCYVIALQRQRALSHRPLP
ARITPRGQVHILATAVLVLMVVTAFAQLL

Sequences:

>Translated_109_residues
MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAASCCYVIALQRQRALSHRPLP
ARITPRGQVHILATAVLVLMVVTAFAQLL
>Mature_109_residues
MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAASCCYVIALQRQRALSHRPLP
ARITPRGQVHILATAVLVLMVVTAFAQLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2273_MYCTU (P64971)

Other databases:

- EMBL:   BX842579
- EMBL:   AE000516
- PIR:   E70730
- RefSeq:   NP_216789.1
- RefSeq:   NP_336803.1
- EnsemblBacteria:   EBMYCT00000001063
- EnsemblBacteria:   EBMYCT00000071079
- GeneID:   888440
- GeneID:   924090
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2334
- KEGG:   mtu:Rv2273
- TIGR:   MT2334
- TubercuList:   Rv2273
- GeneTree:   EBGT00050000018711
- HOGENOM:   HBG565230
- OMA:   WTRTALA
- ProtClustDB:   CLSK791742
- InterPro:   IPR003807

Pfam domain/function: PF02656 DUF202

EC number: NA

Molecular weight: Translated: 11440; Mature: 11440

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1baeda60)-; HASH(0x1a40d434)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHH
SCCYVIALQRQRALSHRPLPARITPRGQVHILATAVLVLMVVTAFAQLL
HHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHH
SCCYVIALQRQRALSHRPLPARITPRGQVHILATAVLVLMVVTAFAQLL
HHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036