| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823456
Identifier: 148823456
GI number: 148823456
Start: 2534434
End: 2535321
Strand: Direct
Name: 148823456
Synonym: TBFG_12277
Alternate gene names: NA
Gene position: 2534434-2535321 (Clockwise)
Preceding gene: 148823455
Following gene: 148823459
Centisome position: 57.28
GC content: 66.22
Gene sequence:
>888_bases GTGCCTACCGACGCGCTAACAATTCTCGAGAAGGCCGGCGGGTTCGCCACCACCGCGCAATTGCTCACGGTCATGACCCG CCAACAGCTCGACGTCCAAGTGAAAAACGGCGGCCTCGTTCGCGTTTGGTACGGGGTCTACGCGGCACAAGAGCCGGACC TGTTGGGCCGCTTGGCGGCTCTCGATGTGTTCATGGGGGGGCACGCCGTCGCGTGTCTGGGCACCGCCGCCGCGTTGTAT GGATTCGACACGGAAAACACCGTCGCTATCCATATGCTCGATCCCGGAGTAAGGATGCGGCCCACGGTCGGTCTGATGGT CCACCAACGCGTCGGTGCCCGGCTCCAACGGGTGTCAGGTCGTCTCGCGACCGCGCCCGCATGGACTGCCGTGGAGGTCG CACGACAGTTGCGCCGCCCGCGGGCGCTGGCCACCCTCGACGCCGCACTACGGTCAATGCGCTGCGCTCGCAGTGAAATT GAAAACGCCGTTGCTGAGCAGCGAGGCCGCCGAGGCATCGTCGCGGCGCGCGAACTCTTACCCTTCGCCGACGGACGCGC GGAATCGGCCATGGAGAGCGAGGCTCGGCTCGTCATGATCGACCACGGGCTGCCGTTGCCCGAACTTCAATACCCGATAC ACGGCCACGGTGGTGAAATGTGGCGAGTCGACTTCGCCTGGCCCGACATGCGTCTCGCGGCCGAATACGAAAGCATCGAG TGGCACGCGGGACCGGCGGAGATGCTGCGCGACAAGACACGCTGGGCCAAGCTCCAAGAGCTCGGGTGGACGATTGTCCC GATTGTCGTCGACGATGTCAGACGCGAACCCGGCCGCCTGGCGGCCCGCATCGCCCGCCACCTCGACCGCGCGCGTATGG CCGGCTGA
Upstream 100 bases:
>100_bases ATCGCACGCGCGAGGTCCGCGCCGTGCGATTCTGCGTCTGCTCGCCAGTTATCCCCAGCGGTGGCTGGTCAACGCGAGGC GCTCCTCGCATGCTCGGACG
Downstream 100 bases:
>100_bases CCGCTGGTGAGCAGACGCAGAGTCGCACTGCGCCGGCCGGCGCAGTGCGACTCTGCGTCTGCTCGCGCTCAACGGCTGAG GAACTCCTTAGCCACGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MPTDALTILEKAGGFATTAQLLTVMTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALY GFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMRCARSEI ENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIE WHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG
Sequences:
>Translated_295_residues MPTDALTILEKAGGFATTAQLLTVMTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALY GFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMRCARSEI ENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIE WHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG >Mature_294_residues PTDALTILEKAGGFATTAQLLTVMTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYG FDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMRCARSEIE NAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEW HAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32565; Mature: 32434
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDALTILEKAGGFATTAQLLTVMTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAA CCCHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEECCCCEEEEEEEECCCCCCHHHHHHHH LDVFMGGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSG HHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC RLATAPAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELL CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC PFADGRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIE CCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCEEEEEECCCCCEEEECCCCCE WHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG ECCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTDALTILEKAGGFATTAQLLTVMTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAA CCHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEECCCCEEEEEEEECCCCCCHHHHHHHH LDVFMGGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSG HHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC RLATAPAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELL CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC PFADGRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIE CCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCEEEEEECCCCCEEEECCCCCE WHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG ECCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]