Click here to switch to the map view.

The map label for this gene is 148823413

Identifier: 148823413

GI number: 148823413

Start: 2482768

End: 2483478

Strand: Direct

Name: 148823413

Synonym: TBFG_12234

Alternate gene names: NA

Gene position: 2482768-2483478 (Clockwise)

Preceding gene: 148823410

Following gene: 148823414

Centisome position: 56.11

GC content: 66.39

Gene sequence:

>711_bases
GTGAAACTGCTGGGCCACCGGAAGAGCCATGGACACCAAAGGGCCGACGCATCACCCGATGCCGGGTCGAAAGATGGTTG
CCGGCCTGATTCCGGACGCACGTCCGGGTCGGACACATCGCGCGGGTCGCAAACCACCGGCCCCAAGGGCCGGCCCACGC
CCAAGCGCAACCAATCCCGTCGCCACACCAAGAAGGGCCCGGTCGCACCGGCACCAATGACTGCGGCCCAGGCACGGGCC
CGGCGCAAGTCGCTTGCCGGCCCCAAACTTAGCCGCGAGGAACGGAGAGCCGAAAAGGCCGCAAACCGGGCCCGGATGAC
GGAACGCCGGGAACGCATGATGGCCGGCGAAGAGGCCTACCTGCTCCCGCGCGACCGGGGCCCGGTACGCCGCTACGTGC
GCGATGTGGTGGACTCCCGGCGCAACCTGCTCGGGCTGTTCATGCCCTCGGCGTTGACCCTGCTGTTCGTCATGTTTGCC
GTGCCGCAGGTGCAGTTTTACTTGTCTCCGGCGATGTTGATACTGCTGGCCTTGATGACGATCGACGCGATCATCTTGGG
TCGCAAAGTTGGCCGGCTGGTTGACACGAAGTTCCCGTCTAACACCGAAAGCCGGTGGAGGCTGGGTCTTTACGCCGCCG
GCCGAGCTTCCCAGATACGCCGGTTGCGGGCGCCCCGACCCCAAGTCGAGCGCGGCGGCGATGTTGGCTAA

Upstream 100 bases:

>100_bases
GAGCCTTTCATCACTGGCCAGAGTAGGTCTGCGCACCCACACGCGTACCTAAACGCACGCAAATTCCAAACGGGCCCCGC
CGCGAAGTAGCCTGGCGACT

Downstream 100 bases:

>100_bases
CGGACGCCGGAAGTCATCTCACCCGGTGTACACCCTAGTGCTCAGCGGGCGGACCGAACCGATCAAGCCGGCGAAAGGAT
GATCGGCTTCGCGCCGGTGT

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARA
RRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFA
VPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG

Sequences:

>Translated_236_residues
MKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARA
RRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFA
VPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG
>Mature_236_residues
MKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARA
RRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFA
VPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2206_MYCTU (P64951)

Other databases:

- EMBL:   BX842579
- EMBL:   AE000516
- PIR:   G70785
- RefSeq:   NP_216722.2
- RefSeq:   NP_336734.1
- EnsemblBacteria:   EBMYCT00000001876
- EnsemblBacteria:   EBMYCT00000072735
- GeneID:   888107
- GeneID:   924163
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2262
- KEGG:   mtu:Rv2206
- TIGR:   MT2262
- TubercuList:   Rv2206
- GeneTree:   EBGT00050000016004
- HOGENOM:   HBG732586
- OMA:   WYAFVRA
- ProtClustDB:   CLSK799880
- InterPro:   IPR021403

Pfam domain/function: PF11241 DUF3043

EC number: NA

Molecular weight: Translated: 26217; Mature: 26217

Theoretical pI: Translated: 12.16; Mature: 12.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17607908)-; HASH(0x1bbaa5ec)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHCCCCCCH
>Mature Secondary Structure
MKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036