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The map label for this gene is ctaF

Identifier: 148823406

GI number: 148823406

Start: 2475379

End: 2475798

Strand: Reverse

Name: ctaF

Synonym: TBFG_12227

Alternate gene names: 148823406

Gene position: 2475798-2475379 (Counterclockwise)

Preceding gene: 148823407

Following gene: 148823405

Centisome position: 55.96

GC content: 62.38

Gene sequence:

>420_bases
ATGCATATCGAAGCCCGACTGTTTGAGTTTGTCGCCGCGTTCTTCGTGGTGACGGCGGTGCTGTACGGCGTGTTGACCTC
GATGTTCGCCACCGGTGGTGTCGAGTGGGCTGGCACCACTGCGCTGGCGCTTACCGGCGGCATGGCGTTGATCGTCGCCA
CCTTCTTCCGGTTTGTGGCCCGCCGGTTAGATTCCCGGCCCGAGGACTACGAAGGCGCTGAAATCAGCGACGGCGCAGGA
GAACTTGGATTCTTCAGTCCGCATAGCTGGTGGCCGATCATGGTCGCGTTGTCCGGCTCGGTGGCAGCGGTCGGCATCGC
GTTGTGGCTCCCGTGGCTGATCGCCGCCGGTGTGGCATTCATCCTCGCCTCGGCGGCCGGATTGGTCTTCGAATATTACG
TCGGTCCTGAGAAGCACTGA

Upstream 100 bases:

>100_bases
GCCCTGCGGGCGATCAACCAGCCGCCCCTTGCGGTGACCACCCACCCGTTTGATACTCGCCGCGGTGAATTGGCCCCGCA
GCCCGTAGGTTAGGACGCTC

Downstream 100 bases:

>100_bases
TCCGGCGCCGGGAAGGTCACAATCAGGGCATCAGTTGACCAGTAGCACGGTTGCCCAGACTTCTCGGTCCTGCCCGGTTG
GGTAGGGTTTCCGTGGCACC

Product: integral membrane protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MHIEARLFEFVAAFFVVTAVLYGVLTSMFATGGVEWAGTTALALTGGMALIVATFFRFVARRLDSRPEDYEGAEISDGAG
ELGFFSPHSWWPIMVALSGSVAAVGIALWLPWLIAAGVAFILASAAGLVFEYYVGPEKH

Sequences:

>Translated_139_residues
MHIEARLFEFVAAFFVVTAVLYGVLTSMFATGGVEWAGTTALALTGGMALIVATFFRFVARRLDSRPEDYEGAEISDGAG
ELGFFSPHSWWPIMVALSGSVAAVGIALWLPWLIAAGVAFILASAAGLVFEYYVGPEKH
>Mature_139_residues
MHIEARLFEFVAAFFVVTAVLYGVLTSMFATGGVEWAGTTALALTGGMALIVATFFRFVARRLDSRPEDYEGAEISDGAG
ELGFFSPHSWWPIMVALSGSVAAVGIALWLPWLIAAGVAFILASAAGLVFEYYVGPEKH

Specific function: Part of cytochrome c oxidase, its function is unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX4_MYCBO (P64948)

Other databases:

- EMBL:   BX248341
- RefSeq:   NP_855871.1
- ProteinModelPortal:   P64948
- EnsemblBacteria:   EBMYCT00000017842
- GeneID:   1091343
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb2222c
- GeneTree:   EBGT00050000017419
- HOGENOM:   HBG566773
- OMA:   GWVFEYY
- ProtClustDB:   CLSK872027
- BioCyc:   MBOV233413:MB2222C-MONOMER
- BRENDA:   1.9.3.1
- InterPro:   IPR021050

Pfam domain/function: PF12270 Cyt_c_ox_IV

EC number: =1.9.3.1

Molecular weight: Translated: 14865; Mature: 14865

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b5816a0)-; HASH(0x1b1c2a14)-; HASH(0x1b8b6b0c)-; HASH(0x1b561c90)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIEARLFEFVAAFFVVTAVLYGVLTSMFATGGVEWAGTTALALTGGMALIVATFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRLDSRPEDYEGAEISDGAGELGFFSPHSWWPIMVALSGSVAAVGIALWLPWLIAAGVAF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ILASAAGLVFEYYVGPEKH
HHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MHIEARLFEFVAAFFVVTAVLYGVLTSMFATGGVEWAGTTALALTGGMALIVATFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRLDSRPEDYEGAEISDGAGELGFFSPHSWWPIMVALSGSVAAVGIALWLPWLIAAGVAF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ILASAAGLVFEYYVGPEKH
HHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972