Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148823404

Identifier: 148823404

GI number: 148823404

Start: 2473650

End: 2474294

Strand: Reverse

Name: 148823404

Synonym: TBFG_12225

Alternate gene names: NA

Gene position: 2474294-2473650 (Counterclockwise)

Preceding gene: 148823405

Following gene: 148823399

Centisome position: 55.92

GC content: 67.13

Gene sequence:

>645_bases
ATGGTGAGCAGATATTCCGCATACCGGCGTGGGCCGGATGTAATCTCGCCGGACGTCATCGATCGCATCCTGGTTGGGGC
ATGTGCCGCGGTGTGGCTGGTGTTCACCGGCGTGTCGGTGGCCGCCGCTGTCGCCCTGATGGACCTGGGTAGGGGCTTCC
ACGAGATGGCCGGAAACCCGCACACCACGTGGGTGCTGTACGCCGTAATTGTGGTCTCCGCACTGGTCATCGTGGGCGCG
ATACCGGTGCTGTTGCGAGCTCGCCGCATGGCTGAGGCCGAGCCCGCGACGAGGCCGACGGGTGCATCCGTGCGGGGCGG
GCGATCGATCGGACCCGGGCATCCGGCGAAACGCGCTGTGGCCGAGTCGGCACCCGTACAGCACGCGGATGCATTCGAGG
TGGCCGCCGAGTGGTCCAGTGAGGCGGTGGACCGGATCTGGTTGCGCGGGACAGTCGTGTTGACCAGTGCGATTGGCATT
GCGTTGATTGCCGTGGCGGCGGCGACCTACCTCATGGCGGTCGGTCACGACGGGCCATCTTGGATCAGCTACGGGTTGGC
CGGGGTGGTCACCGCGGGCATGCCGGTGATCGAGTGGCTATACGCTCGGCAGCTGCGCCGGGTGGTGGCGCCCCAGTCCA
GTTAG

Upstream 100 bases:

>100_bases
CCAGCCTTTTCCGGGTCAGCAAACTCAACTGCTCGATCACCACGAGCGACGGAACGGTGCTCTCATCGAACTCCAACGAT
GGACCGCAAACGAGCTGCTG

Downstream 100 bases:

>100_bases
CCGGGCTGTGCTTGATTTGCCCGGTTCCTTCCCGGGTCGTGCCGACCCGGGTCGTCGCCGGGCTGTGCTTGATTTGCCCG
GTTCCTTCCCGGGTCGTGCC

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVSRYSAYRRGPDVISPDVIDRILVGACAAVWLVFTGVSVAAAVALMDLGRGFHEMAGNPHTTWVLYAVIVVSALVIVGA
IPVLLRARRMAEAEPATRPTGASVRGGRSIGPGHPAKRAVAESAPVQHADAFEVAAEWSSEAVDRIWLRGTVVLTSAIGI
ALIAVAAATYLMAVGHDGPSWISYGLAGVVTAGMPVIEWLYARQLRRVVAPQSS

Sequences:

>Translated_214_residues
MVSRYSAYRRGPDVISPDVIDRILVGACAAVWLVFTGVSVAAAVALMDLGRGFHEMAGNPHTTWVLYAVIVVSALVIVGA
IPVLLRARRMAEAEPATRPTGASVRGGRSIGPGHPAKRAVAESAPVQHADAFEVAAEWSSEAVDRIWLRGTVVLTSAIGI
ALIAVAAATYLMAVGHDGPSWISYGLAGVVTAGMPVIEWLYARQLRRVVAPQSS
>Mature_214_residues
MVSRYSAYRRGPDVISPDVIDRILVGACAAVWLVFTGVSVAAAVALMDLGRGFHEMAGNPHTTWVLYAVIVVSALVIVGA
IPVLLRARRMAEAEPATRPTGASVRGGRSIGPGHPAKRAVAESAPVQHADAFEVAAEWSSEAVDRIWLRGTVVLTSAIGI
ALIAVAAATYLMAVGHDGPSWISYGLAGVVTAGMPVIEWLYARQLRRVVAPQSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22490; Mature: 22490

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRYSAYRRGPDVISPDVIDRILVGACAAVWLVFTGVSVAAAVALMDLGRGFHEMAGNP
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
HTTWVLYAVIVVSALVIVGAIPVLLRARRMAEAEPATRPTGASVRGGRSIGPGHPAKRAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AESAPVQHADAFEVAAEWSSEAVDRIWLRGTVVLTSAIGIALIAVAAATYLMAVGHDGPS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WISYGLAGVVTAGMPVIEWLYARQLRRVVAPQSS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVSRYSAYRRGPDVISPDVIDRILVGACAAVWLVFTGVSVAAAVALMDLGRGFHEMAGNP
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
HTTWVLYAVIVVSALVIVGAIPVLLRARRMAEAEPATRPTGASVRGGRSIGPGHPAKRAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AESAPVQHADAFEVAAEWSSEAVDRIWLRGTVVLTSAIGIALIAVAAATYLMAVGHDGPS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WISYGLAGVVTAGMPVIEWLYARQLRRVVAPQSS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]