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The map label for this gene is ydhO [C]

Identifier: 148823397

GI number: 148823397

Start: 2464318

End: 2465499

Strand: Reverse

Name: ydhO [C]

Synonym: TBFG_12218

Alternate gene names: 148823397

Gene position: 2465499-2464318 (Counterclockwise)

Preceding gene: 148823399

Following gene: 148823396

Centisome position: 55.72

GC content: 65.91

Gene sequence:

>1182_bases
ATGGCCCGTTTAAGGAAGCAAATTTTGAGGCTCGACCAGAGGTGGTTGATCGCGCGTGTAATCATGCGGTCCGCCATAGG
TTTCTTTGCGAGCTTCACCGTCTCCTCCGGCGTCCTGGCCGCGAATGTGCTGGCTGATCCGGCCGACGACGCGCTGGCCA
AGCTCAACGAGTTATCCCGGCAGGCCGAGCAGACCACCGAGGCGCTGCACAGTGCGCAGCTGGATCTCAACGAAAAGCTC
GCTGCCCAGCGGGCCGCCGACCAGAAGCTTGCGGACAACAGAACGGCCTTGGATGCTGCGAGAGCACGCTTGGCGACTTT
TCAGACGGCGGTGAACAAGGTCGCGGCCGCTACCTACATGGGTGGTCGTACCCACGGCATGGATGCGATCCTGACGGCGG
AGTCCCCGCAACTGTTGATCGATCGGCTATCGGTACAGCGGGTGATGGCGCATCAAATGTCCACGCAGATGGCCCGTTTC
AAGGCCGCTGGAGAACAGGCCGTCAAGGCCGAGCAGGCTGCAGCCAAATCGGCGGCCGATGCCAGGTCCGCGGCCGAGCA
AGCTGCCGCGGTACGAGCGAATCTGCAGCACAAACAGAGCCAGCTGCAGGTGCAGATTGCCGTCGTCAAGTCGCAATACG
TCGCGTTGACGCCGGAGGAGCGCACGGCCCTCGCTGATCCAGGACCGGTCCCGGCGGTTGCTGCGATCGCCCCCGGGGCC
CCACCTGCGGCGTTGCCGCCCGGTGCGCCGCCTGGCGACGGCCCGGCGCCTGGCGTGGCGCCGCCGCCTGGTGGGATGCC
CGGATTGCCTTTCGTGCAGCCCGACGGCGCTGGCGGCGACCGTACGGCCGTTGTCCAAGCGGCGTTGACGCAGGTCGGCG
CGCCCTACGCGTGGGGTGGTGCCGCGCCCGGCGGGTTCGACTGCTCAGGCTTGGTGATGTGGGCGTTCCAGCAGGCTGGT
ATCGCGTTACCGCACTCCAGCCAGGCGCTGGCTCACGGTGGTCAGCCGGTCGCGTTGTCGGATCTGCAGCCCGGCGACGT
GTTGACCTTCTATTCCGACGCGTCACACGCAGGCATCTACATCGGTGATGGTCTTATGGTTCATTCCTCCACCTACGGTG
TTCCGGTGCGGGTGGTGCCGATGGACTCGTCGGGGCCGATCTACGACGCCCGCCGTTACTGA

Upstream 100 bases:

>100_bases
TGGTAGAAATCTACCCATTTTCTTAACTTCCCCTTTTGGACAATTCCGAGATCGTTTCGTAACCTGTTTGAGACCTAAAC
CAGCTCGACGTCATCCGTCG

Downstream 100 bases:

>100_bases
CCGGCTCGTCGCGCGGCGGCTTTGCCCTCGGATCTTGCTGGCCTGTCTGTTTGTTGCGGAGCTGATTGGCGCGGCGGCCC
TGTCTGGTAATCCGGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MARLRKQILRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEALHSAQLDLNEKL
AAQRAADQKLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARF
KAAGEQAVKAEQAAAKSAADARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGA
PPAALPPGAPPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDCSGLVMWAFQQAG
IALPHSSQALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY

Sequences:

>Translated_393_residues
MARLRKQILRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEALHSAQLDLNEKL
AAQRAADQKLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARF
KAAGEQAVKAEQAAAKSAADARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGA
PPAALPPGAPPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDCSGLVMWAFQQAG
IALPHSSQALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY
>Mature_392_residues
ARLRKQILRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEALHSAQLDLNEKLA
AQRAADQKLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARFK
AAGEQAVKAEQAAAKSAADARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGAP
PAALPPGAPPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDCSGLVMWAFQQAGI
ALPHSSQALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=101, Percent_Identity=33.6633663366337, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786421, Length=116, Percent_Identity=35.3448275862069, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 40736; Mature: 40604

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLRKQILRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHHHHHH
QAEQTTEALHSAQLDLNEKLAAQRAADQKLADNRTALDAARARLATFQTAVNKVAAATYM
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARFKAAGEQAVKAEQAAAKSAAD
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGA
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCC
PPAALPPGAPPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCC
AAPGGFDCSGLVMWAFQQAGIALPHSSQALAHGGQPVALSDLQPGDVLTFYSDASHAGIY
CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCEE
IGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY
EECCEEEECCCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
ARLRKQILRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHHHHHH
QAEQTTEALHSAQLDLNEKLAAQRAADQKLADNRTALDAARARLATFQTAVNKVAAATYM
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARFKAAGEQAVKAEQAAAKSAAD
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGA
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCC
PPAALPPGAPPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCC
AAPGGFDCSGLVMWAFQQAGIALPHSSQALAHGGQPVALSDLQPGDVLTFYSDASHAGIY
CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCEE
IGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY
EECCEEEECCCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]