| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is hspX
Identifier: 148823247
GI number: 148823247
Start: 2293110
End: 2293544
Strand: Reverse
Name: hspX
Synonym: TBFG_12068
Alternate gene names: 148823247
Gene position: 2293544-2293110 (Counterclockwise)
Preceding gene: 148823249
Following gene: 148823246
Centisome position: 51.84
GC content: 61.61
Gene sequence:
>435_bases ATGGCCACCACCCTTCCCGTTCAGCGCCACCCGCGGTCCCTCTTCCCCGAGTTTTCTGAGCTGTTCGCGGCCTTCCCGTC ATTCGCCGGACTCCGGCCCACCTTCGACACCCGGTTGATGCGGCTGGAAGACGAGATGAAAGAGGGGCGCTACGAGGTAC GCGCGGAGCTTCCCGGGGTCGACCCCGACAAGGACGTCGACATTATGGTCCGCGATGGTCAGCTGACCATCAAGGCCGAG CGCACCGAGCAGAAGGACTTCGACGGTCGCTCGGAATTCGCGTACGGTTCCTTCGTTCGCACGGTGTCGCTGCCGGTAGG TGCTGACGAGGACGACATTAAGGCCACCTACGACAAGGGCATTCTTACTGTGTCGGTGGCGGTTTCGGAAGGGAAGCCAA CCGAAAAGCACATTCAGATCCGGTCCACCAACTGA
Upstream 100 bases:
>100_bases GGACAAATGGCCCGCGCTTCGGGGACTTCTGTCCCTAGCCCTGGCCACGATGGGCTGGTCGGATCAAAGGCATCCGTTTC CATCGATTAGGAGGCATCAA
Downstream 100 bases:
>100_bases CCACTGGGTCCGTGCTGATGACCGCAGCGGCTGATGTCACCCGGCGCTCGCCGCGGCGCGTGTTCCGTGACCGCCGCGAG GCCGGCCGGGTGCTGGCGGA
Product: heat shock protein hspX
Products: NA
Alternate protein names: 16 kDa antigen; HSP 16.3
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDGQLTIKAE RTEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
Sequences:
>Translated_144_residues MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDGQLTIKAE RTEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN >Mature_143_residues ATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDGQLTIKAER TEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
Specific function: Unknown
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Secreted, cell wall. Note=Probably the external side of the cell wall (By similarity)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 14KD_MYCBO (P0A5B8)
Other databases:
- EMBL: BX248341 - RefSeq: NP_855707.1 - ProteinModelPortal: P0A5B8 - SMR: P0A5B8 - EnsemblBacteria: EBMYCT00000015323 - GeneID: 1094114 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2057c - GeneTree: EBGT00050000016058 - HOGENOM: HBG748242 - OMA: AGYDKGI - ProtClustDB: CLSK791576 - BioCyc: MBOV233413:MB2057C-MONOMER - InterPro: IPR002068 - InterPro: IPR008978
Pfam domain/function: PF00011 HSP20; SSF49764 HSP20_chap
EC number: NA
Molecular weight: Translated: 16227; Mature: 16096
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGV CCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC DPDKDVDIMVRDGQLTIKAERTEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKG CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCC ILTVSVAVSEGKPTEKHIQIRSTN EEEEEEEECCCCCCCCEEEEEECC >Mature Secondary Structure ATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGV CCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC DPDKDVDIMVRDGQLTIKAERTEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKG CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCC ILTVSVAVSEGKPTEKHIQIRSTN EEEEEEEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972