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The map label for this gene is 148823224

Identifier: 148823224

GI number: 148823224

Start: 2266284

End: 2266526

Strand: Direct

Name: 148823224

Synonym: TBFG_12041

Alternate gene names: NA

Gene position: 2266284-2266526 (Clockwise)

Preceding gene: 148823221

Following gene: 148823225

Centisome position: 51.22

GC content: 61.32

Gene sequence:

>243_bases
GTGTATAGTGGTGTTGTGTCACGGACCAACATCGAGATCGACGACGAACTCGTGGCCGCCGCACAGCGGATGTACCGACT
CGATTCCAAGCGAAGTGCCGTCGACCTCGCGCTGCGCCGGCTCGTGGGTGAACCGTTGGGCCGCGATGAGGCTTTGGCGC
TGCAGGGCAGCGGTTTCGACTTCAGCAACGATGAGATCGAATCGTTCTCGGATACGGACCGCAAGCTCGCCGACGAGTCG
TAG

Upstream 100 bases:

>100_bases
CGATCTCGTCCATCAGGCATGCTCCACATCGCCTGCACCAGGGCAAAGCTGCACCGGTCGTGCGAGCCGGTTAGCAAATA
GCACGTTCATACACATAAAT

Downstream 100 bases:

>100_bases
ATGATCGTCGACACCTCGGTCTGGATCGCATATCTCTCCACGTCAGAGTCGTTGGCCAGTCGCTGGCTAGCCGATCGCAT
TGCCGCTGACTCGACGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES

Sequences:

>Translated_80_residues
MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
>Mature_80_residues
MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES

Specific function: Unknown

COG id: COG5450

COG function: function code K; Transcription regulator of the Arc/MetJ class

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1560

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2009_MYCTU (Q10848)

Other databases:

- EMBL:   BX842578
- EMBL:   AE000516
- PIR:   G70759
- RefSeq:   NP_216525.1
- RefSeq:   NP_336528.1
- EnsemblBacteria:   EBMYCT00000002404
- EnsemblBacteria:   EBMYCT00000069917
- GeneID:   888925
- GeneID:   923371
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2064.1
- KEGG:   mtu:Rv2009
- TIGR:   MT2064.1
- TubercuList:   Rv2009
- GeneTree:   EBGT00050000018332
- HOGENOM:   HBG729846
- ProtClustDB:   CLSK2748635
- InterPro:   IPR019239

Pfam domain/function: PF09957 DUF2191

EC number: NA

Molecular weight: Translated: 8884; Mature: 8884

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
FSNDEIESFSDTDRKLADES
CCCCCHHHCCCCHHHCCCCC
>Mature Secondary Structure
MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
FSNDEIESFSDTDRKLADES
CCCCCHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036