| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823213
Identifier: 148823213
GI number: 148823213
Start: 2251199
End: 2251975
Strand: Reverse
Name: 148823213
Synonym: TBFG_12030
Alternate gene names: NA
Gene position: 2251975-2251199 (Counterclockwise)
Preceding gene: 148823214
Following gene: 148823209
Centisome position: 50.9
GC content: 63.58
Gene sequence:
>777_bases ATGAGTTTCCACGATCTTCATCACCAAGGTGTTCCGTTCGTGTTGCCCAACGCCTGGGATGTGCCGTCGGCCCTGGCCTA CCTCGCGGAGGGCTTCACGGCTATCGGCACAACCAGTTTCGGGGTCTCGTCCAGCGGCGGGCACCCGGACGGGCACCGCG CCACTCGCGGCGCCAACATCGCACTGGCGGCCGCCCTGGCACCGCTGCAATGCTACGTCAGCGTCGACATCGAGGACGGA TACAGCGACGAACCCGACGCCATTGCTGACTACGTCGCACAACTGTCGACAGCCGGAATCAATATCGAGGACAGTAGCGC CGAAAAGCTCATCGACCCCGCCCTGGCAGCCGCTAAAATCGTTGCGATCAAACAACGTAACCCCGAGGTGTTCGTCAACG CCCGCGTCGACACCTATTGGTTGCGCCAGCACGCCGATACCACCAGCACGATCCAGCGCGCACTTCGCTACGTCGATGCC GGCGCCGACGGCGTCTTTGTCCCACTGGCCAACGATCCCGACGAACTTGCTGAGCTCACTCGCAACATTCCGTGCCCGGT TAACACGTTGCCCGTGCCCGGCTTGACGATCGCCGACCTTGGTGAGCTCGGGGTGGCCCGGGTGTCAACCGGTTCAGTGC CCTACAGCGCGGGGTTGTATGCAGCGGCCCACGCGGCTCGGGCCGTGAGCGACGGAGAGCAGCTGCCACGGTCCGTACCG TACGCCGAACTGCAGGCACGCTTGGTTGACTACGAGAACCGCACGAGTACAACGTAA
Upstream 100 bases:
>100_bases ACCTAGTTGAATCGGCCAGCGGCGACGGGTCTCACCGACTGACCCTGCTGACGCGGGTCACACATACAATCAGGCCCATC CGCCAGCAGGGAGGTAGGGA
Downstream 100 bases:
>100_bases CTGGCTAGTTCCGACCTGGTAACTCTGGCCGGATCGACCGCACGCACACCGTACTCACGGACGGGGCATCATGGCGGTTG CGCCCGTATTCTCGGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIALAAALAPLQCYVSVDIEDG YSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDA GADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP YAELQARLVDYENRTSTT
Sequences:
>Translated_258_residues MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIALAAALAPLQCYVSVDIEDG YSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDA GADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP YAELQARLVDYENRTSTT >Mature_257_residues SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIALAAALAPLQCYVSVDIEDGY SDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAG ADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVPY AELQARLVDYENRTSTT
Specific function: Unknown
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1998_MYCTU (Q10859)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: D70758 - RefSeq: NP_216514.1 - RefSeq: NP_336517.1 - ProteinModelPortal: Q10859 - EnsemblBacteria: EBMYCT00000002394 - EnsemblBacteria: EBMYCT00000071264 - GeneID: 888853 - GeneID: 923387 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2054 - KEGG: mtu:Rv1998c - TIGR: MT2054 - TubercuList: Rv1998c - GeneTree: EBGT00050000017120 - HOGENOM: HBG341493 - OMA: LPLNVMC - ProtClustDB: CLSK791550 - InterPro: IPR013785 - InterPro: IPR015813 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: NA
Molecular weight: Translated: 27254; Mature: 27122
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI CCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCE ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI EHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT EEEECCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP CCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCHHHCCCCCC YAELQARLVDYENRTSTT HHHHHHHHHCCCCCCCCC >Mature Secondary Structure SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANI CCCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCE ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKI EHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH VAIKQRNPEVFVNARVDTYWLRQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELT EEEECCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH RNIPCPVNTLPVPGLTIADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGEQLPRSVP CCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCHHHCCCCCC YAELQARLVDYENRTSTT HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036