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The map label for this gene is ydjE [C]

Identifier: 148823193

GI number: 148823193

Start: 2229973

End: 2231418

Strand: Reverse

Name: ydjE [C]

Synonym: TBFG_12010

Alternate gene names: 148823193

Gene position: 2231418-2229973 (Counterclockwise)

Preceding gene: 148823194

Following gene: 148823190

Centisome position: 50.43

GC content: 59.82

Gene sequence:

>1446_bases
GTGGTCGGCCCGCGGACGAGAGGATATGCGATCCACAAGCTGGGTTTCTGCAGCGTCGTCATGCTCGGGATCAACTCGAT
AATCGGCGCCGGTATCTTCCTAACTCCAGGTGAGGTGATCGGGCTCGCAGGACCCTTCGCGCCGATGGCCTATGTTTTAG
CTGGCATTTTCGCGGGTGTCGTGGCGATCGTCTTCGCGACGGCGGCAAGGTACGTCAGAACAAACGGTGCCTCCTACGCC
TACACAACGGCCGCATTTGGGCGCCGGATCGGCATCTATGTCGGTGTCACCCACGCCATTACCGCGTCCATCGCTTGGGG
GGTGTTGGCTTCTTTTTTCGTCTCGACGCTGTTGCGAGTGGCCTTCCCCGACAAGGCCTGGGCCGACGCCGAGCAACTGT
TCAGTGTGAAGACGCTGACGTTTCTCGGCTTTATCGGCGTGCTGTTGGCCATCAACCTCTTCGGCAACCGGGCGATCAAG
TGGGCCAACGGAACGTCAACGGTAGGCAAGGCATTCGCGCTCTCGGCATTCATTGTCGGCGGGCTGTGGATCATCACCAC
CCAGCACGTGAACAACTACGCAACGGCGTGGTCGGCATACAGCGCGACCCCGTACTCGTTGCTTGGCGTCGCCGAAATTG
GCAAGGGCACGTTCTCGAGTATGGCGCTGGCCACGATTGTCGCGTTGTACGCATTCACCGGTTTCGAATCGATCGCGAAC
GCCGCCGAAGAAATGGACGCGCCGGACCGGAACCTGCCGAGAGCTATACCGATCGCGATCTTCTCGGTTGGCGCGATCTA
CTTGCTCACCCTAACGGTAGCGATGCTGCTCGGATCGAACAAGATCGCCGCGTCGGACGACACCGTGAAACTGGCCGCGG
CCATCGGAAACGCTACCTTCCGAACGATCATCGTCGTCGGAGCCCTGATATCGATGTTCGGCATCAATGTCGCGGCCTCG
TTCGGTGCACCGCGGCTTTGGACCGCGTTAGCGGACAGCGGGGTTCTGCCGACACGCTTGTCACGCAAGAACCAATACGA
CGTGCCGATGGTCTCCTTCGCAATTACGGCGTCGTTGGCGCTCGCATTCCCGTTGGCGCTGCGGTTCGACAACCTGCACC
TGACCGGCCTGGCGGTGATCGCCCGATTCGTCCAGTTCATCATCGTGCCGATCGCTCTCATCGCATTGGCGAGGTCTCAG
GCAGTAGAACATGCTGCTGTGCGGCGAAATGCGTTCACCGACAAGGTGTTACCGCTTGTTGCGATCGTGGTCTCGGTTGG
GCTGGCAGTGTCCTACGACTACCGCTGCATCTTTCTAGTGCGGGGTGGTCCGAACTACTTCTCGATTGCTTTGATCGTGA
TCACGTTCATCGTGGTACCGGCGATGGCTTATCTGCACTACTACCGAATCATTCGCCGGGTTGGCGATCGGCCGAGCACT
CGCTAG

Upstream 100 bases:

>100_bases
CTCACCTGCAGCGCCGGCATCGACAGGCCGGGAGCTCAAGAATCGTCGCTAGAGAATCTATGGTGCGTTAGAGGATTCCC
TGCTAGACAGCCTTGGTGCG

Downstream 100 bases:

>100_bases
ATTCCGTTGGCGCTGAGCTCGAACGGGAGAACACAACGGCGAGCGATGGCGGGAATAGCCTGGTCGGTGCGGGCAAGATT
TCAACCTGCATTCCCGGATC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA
YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIK
WANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISMFGINVAAS
FGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQ
AVEHAAVRRNAFTDKVLPLVAIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
R

Sequences:

>Translated_481_residues
MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA
YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIK
WANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISMFGINVAAS
FGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQ
AVEHAAVRRNAFTDKVLPLVAIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
R
>Mature_481_residues
MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGVVAIVFATAARYVRTNGASYA
YTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRVAFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIK
WANGTSTVGKAFALSAFIVGGLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATFRTIIVVGALISMFGINVAAS
FGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLALAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQ
AVEHAAVRRNAFTDKVLPLVAIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
R

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI115648063, Length=339, Percent_Identity=26.8436578171091, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI115648022, Length=339, Percent_Identity=26.8436578171091, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI186910308, Length=326, Percent_Identity=26.6871165644172, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI186910306, Length=326, Percent_Identity=26.6871165644172, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI186910304, Length=326, Percent_Identity=26.6871165644172, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17540018, Length=375, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17568033, Length=334, Percent_Identity=26.3473053892216, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI32566699, Length=266, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24668806, Length=401, Percent_Identity=25.4364089775561, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21356285, Length=401, Percent_Identity=25.4364089775561, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24668802, Length=401, Percent_Identity=25.4364089775561, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI45550968, Length=373, Percent_Identity=26.0053619302949, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19921172, Length=373, Percent_Identity=26.0053619302949, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221331183, Length=354, Percent_Identity=26.8361581920904, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17647653, Length=354, Percent_Identity=26.8361581920904, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24664379, Length=354, Percent_Identity=26.8361581920904, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24651635, Length=339, Percent_Identity=25.0737463126844, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24651633, Length=339, Percent_Identity=25.0737463126844, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51117; Mature: 51117

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCEEECCCHHHCCCCCHHHHHHHHHHHHHHH
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
HHHHHHHHHHHHHCCCCCEEEHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
HCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHC
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
CEEEEEEHHHCCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHH
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
HHHHHHHEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
HHHHHHHHHEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
R
C
>Mature Secondary Structure
MVGPRTRGYAIHKLGFCSVVMLGINSIIGAGIFLTPGEVIGLAGPFAPMAYVLAGIFAGV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCEEECCCHHHCCCCCHHHHHHHHHHHHHHH
VAIVFATAARYVRTNGASYAYTTAAFGRRIGIYVGVTHAITASIAWGVLASFFVSTLLRV
HHHHHHHHHHHHHCCCCCEEEHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AFPDKAWADAEQLFSVKTLTFLGFIGVLLAINLFGNRAIKWANGTSTVGKAFALSAFIVG
HCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHC
GLWIITTQHVNNYATAWSAYSATPYSLLGVAEIGKGTFSSMALATIVALYAFTGFESIAN
CEEEEEEHHHCCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAEEMDAPDRNLPRAIPIAIFSVGAIYLLTLTVAMLLGSNKIAASDDTVKLAAAIGNATF
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHH
RTIIVVGALISMFGINVAASFGAPRLWTALADSGVLPTRLSRKNQYDVPMVSFAITASLA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
LAFPLALRFDNLHLTGLAVIARFVQFIIVPIALIALARSQAVEHAAVRRNAFTDKVLPLV
HHHHHHHEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVVSVGLAVSYDYRCIFLVRGGPNYFSIALIVITFIVVPAMAYLHYYRIIRRVGDRPST
HHHHHHHHHEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]