Click here to switch to the map view.

The map label for this gene is 148823177

Identifier: 148823177

GI number: 148823177

Start: 2215944

End: 2216342

Strand: Direct

Name: 148823177

Synonym: TBFG_11994

Alternate gene names: NA

Gene position: 2215944-2216342 (Clockwise)

Preceding gene: 148823171

Following gene: 148823178

Centisome position: 50.08

GC content: 65.41

Gene sequence:

>399_bases
GTGCGCCGCGCCATGGTAATCGTGGCCGACAAGGCGGCCGGTCGGGTCGCTGATCCGGTCTTGCGGCCGGTGGGCGCGCT
GGGCGATTTCTTCGCGATGACGCTCGACACGTCCGTGTGCATGTTCAAGCCGCCTTTCGCGTGGCGTGAATACCTACTTC
AGTGCTGGTTCGTGGCGCGGGTGTCGACGCTGCCTGGGGTGTTGATGACGATCCCATGGGCGGTGATCTCGGGGTTTCTC
TTCAACGTCTTGCTGACCGACATCGGTGCCGCGGACTTTTCCGGCACCGGCTGTGCGATCTTCACCGTGAACCAAAGCGC
CCCGATCGTCACGGTCTTGGTGGTCGCGGGCGCGGGCGCCACCGCCATGTGCGCCGATCTGGGTGCGCACCATCCGTGA

Upstream 100 bases:

>100_bases
GGTCTCTGCCGCGTACGCTCACCAATGTCACCGATCGTCGACCTGTCCGGGGGGCCAGCGTGCGCCACCTCACCCAACGG
CCCAGCATCGAATCCAGCTG

Downstream 100 bases:

>100_bases
GGAACTCGACGCACTGCGGGTGATGGGCATCAACCCGATCCAAGCGCTAGCGGCTCCGCGCGTGCTGGCGGCCACCACGG
TGTCGTTGGCGCTGAATTCG

Product: integral membrane protein YrbE3a

Products: NA

Alternate protein names: ABC-Transporter Integral Membrane Protein; Integral Membrane A; ABC Transport System Permease Protein; TrnB1 Protein; Membrane A; Integral Membrane; ABC Transporter Integral Membrane Protein; Integral Membrane Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRRAMVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFL
FNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGAHHP

Sequences:

>Translated_132_residues
MRRAMVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFL
FNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGAHHP
>Mature_132_residues
MRRAMVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFL
FNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGAHHP

Specific function: Unknown

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13946; Mature: 13946

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAMVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVAR
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
VSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGA
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCH
TAMCADLGAHHP
HHHHHHHCCCCC
>Mature Secondary Structure
MRRAMVIVADKAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVAR
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
VSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGA
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCH
TAMCADLGAHHP
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA