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The map label for this gene is yngJ [H]

Identifier: 148823145

GI number: 148823145

Start: 2192121

End: 2193212

Strand: Reverse

Name: yngJ [H]

Synonym: TBFG_11962

Alternate gene names: 148823145

Gene position: 2193212-2192121 (Counterclockwise)

Preceding gene: 148823146

Following gene: 148823143

Centisome position: 49.57

GC content: 68.86

Gene sequence:

>1092_bases
GTGGACTTCCGATACAGCACCGAACAAGACGATTTCCGCGCCTCGCTGCGCGGCTTCCTTGGCCGGGGCGCGCCCGTGCG
GGAGATGGCTGCCGCGGACGGATCCGACCGCAGGCTGTGGCAACGGCTTTGCACCGAGCTCGAATTACCCGCGCTGCACG
TCCCGCCGGAGCACGGCGGATTGGGTGCCACCTTAGTCGAGACCGCGATCGCGTTTGCCGAACTCGGCCGGGCGCTCACC
CCAATTCCCTTTGCGGCCACGGTGTTTGCGATCGAAGCGATTCTGCGCATGGGCGACGACGAGCAGCGCAAGCGCCTGCT
CGCCGGTCTGCTTACCGGCGCGCGGATCGGAACGATCGCCGTCAGTGGCCACGACGTCGCGTCGGCTACCACCGTTCGGG
CCGTTCGGCGCGACGGTCGGCCCGCACTCACCGGCGAGTGCACCCCGGTGCTGCACGGTCACGTCGCAGACCTGTTCGTG
GTGCCCGCGGTGGCCGACGGGTCGATCGTTCTGCACGTCGTGGCCGCCGACGCCCCCGGGGTGACCGTCACACCGTTGCC
CTCGTTTGACATCACCCGTCCGGTCGTCACGCTCCGGCTGGCGGGGTCCCCCGCCGAGCCGCTGACCGCCGGGACGCCCG
ACGATATGGAGCGGGTGCTCGACGTGGCCCGGGTGCTGTTGGCCGCCGAGATGCTGGGCGGCGCCGAGGCCTGCCTCGAC
CTGGCGGTGCAATACGCCGGGCGGCGAACGCAATTCGATCGACCGATCGGTTCCTTCCAGGCGGTCAAGCACGCCTGCGC
CGACATGATGATCGAGATCGACGCCACCCGGGCGACGGTGATGTTCGCCGCGATGAGCGCGGCCAACGGTGACGAACTCC
AGACGGTCGCGCCGCTGGCGAAGGCGCAGACCGCGGAAACCTTTGTGTTATGCGCCGGCTCCGCTCTTCAGATCCACGGT
GCCATCGCCTTCACGTGGGAGCACGACCTGCACCTGTATTACCGCCGGGCCAAGACCACCGAGGCGCTTTTCGGGAGCAG
CGCTCGAAATCGTGCGCTGCTCGCCGAACGCGCGGGGCTTGTGAAAGCCTAG

Upstream 100 bases:

>100_bases
GCGACGATCTATGCCGGCAGCTCGCAGATCCAGCGCAACGTGATCGGCGAGCGGCTGCTCGGCCTCCCCAAGGAGCCGCG
GCCCGAAGTGCTCTGCTGAC

Downstream 100 bases:

>100_bases
GCGCCCAGCGCGGCCAGCGCCGCTTCGTAGTTGGGTTCTTGCGCGATTTCCGGCACCAATTCCGTGTAGGCGACGTTGCC
GTCCGCGCCGATCACCACGA

Product: acyl-CoA dehydrogenase fadE18

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALT
PIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFV
VPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVVTLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD
LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSALQIHG
AIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGLVKA

Sequences:

>Translated_363_residues
MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALT
PIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFV
VPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVVTLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD
LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSALQIHG
AIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGLVKA
>Mature_363_residues
MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGGLGATLVETAIAFAELGRALT
PIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIAVSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFV
VPAVADGSIVLHVVAADAPGVTVTPLPSFDITRPVVTLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD
LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLAKAQTAETFVLCAGSALQIHG
AIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGLVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=331, Percent_Identity=26.8882175226586, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4501859, Length=329, Percent_Identity=24.9240121580547, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI187960098, Length=384, Percent_Identity=24.7395833333333, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4557231, Length=384, Percent_Identity=24.7395833333333, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI87081958, Length=360, Percent_Identity=26.9444444444444, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786223, Length=361, Percent_Identity=26.0387811634349, Blast_Score=92, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=376, Percent_Identity=28.7234042553192, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17570075, Length=387, Percent_Identity=25.5813953488372, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17569725, Length=354, Percent_Identity=27.1186440677966, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=381, Percent_Identity=25.7217847769029, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24646207, Length=333, Percent_Identity=26.7267267267267, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21356377, Length=341, Percent_Identity=26.099706744868, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355753, Length=347, Percent_Identity=26.8011527377522, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24660351, Length=356, Percent_Identity=25.561797752809, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666513, Length=310, Percent_Identity=25.4838709677419, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 38538; Mature: 38538

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCC
LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEE
VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG
ECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHEEEEEECCCCEEEEEEECCCCC
VTVTPLPSFDITRPVVTLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD
CEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCHHHHHHHH
KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL
HHCCCCEEEEECCCEEEEEEEEEEEEECCEEEEEEHHHHHHHHHCCCCCCHHHHHHHCCC
VKA
CCC
>Mature Secondary Structure
MDFRYSTEQDDFRASLRGFLGRGAPVREMAAADGSDRRLWQRLCTELELPALHVPPEHGG
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCC
LGATLVETAIAFAELGRALTPIPFAATVFAIEAILRMGDDEQRKRLLAGLLTGARIGTIA
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEE
VSGHDVASATTVRAVRRDGRPALTGECTPVLHGHVADLFVVPAVADGSIVLHVVAADAPG
ECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHEEEEEECCCCEEEEEEECCCCC
VTVTPLPSFDITRPVVTLRLAGSPAEPLTAGTPDDMERVLDVARVLLAAEMLGGAEACLD
CEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATRATVMFAAMSAANGDELQTVAPLA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCHHHHHHHH
KAQTAETFVLCAGSALQIHGAIAFTWEHDLHLYYRRAKTTEALFGSSARNRALLAERAGL
HHCCCCEEEEECCCEEEEEEEEEEEEECCEEEEEEHHHHHHHHHCCCCCCHHHHHHHCCC
VKA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]