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The map label for this gene is dap [H]

Identifier: 148823134

GI number: 148823134

Start: 2182322

End: 2183437

Strand: Direct

Name: dap [H]

Synonym: TBFG_11951

Alternate gene names: 148823134

Gene position: 2182322-2183437 (Clockwise)

Preceding gene: 148823132

Following gene: 148823135

Centisome position: 49.32

GC content: 63.8

Gene sequence:

>1116_bases
ATGGATTCGACTGTAACGGCCTCGATCCGACGCATGCTGGGACTGCTCGCCGCCACATTGCTGCTCGGCGGCTGCACCGG
CCAGCACACGACACGCACAGCGGCGAGCACCACATACACGCCCCACATCAAGGCCAGCAGTCAGGACGTGCTGGACGGCG
CCATCAATGCCGACGAGCCAGGTTGTTCGGCCGCGGTAGGAGTCGAGGGGAAAGTTATCTGGTCAGGCGTTCGCGGCATT
GCGGATCTGGCATCCGGCGCCAAGATCACCACGGACACCGTGTTCGACATCGCGTCGGTGTCCAAGCAGTTCACCGCCAC
CGCGATCCTGCTGCTCGTCGAAGCCGGAAAGCTAACACTCGACGACCCGATATCCCAATACGTACCCGAGCTACCCGACT
GGGCCCAAACCGTCACCGTCGAGCAGCTCATGCATCAAACCAGCGGCATCCCTGATTACGTCGCATTGCTGGCAGCCAGG
GGGTATCAGGTCAGCGACCGCACCATCGAGGCCGAAGCCCGGCAGGCGTTAGCGGCCGCCCCCGAGCTGCAATTCAAGCC
TGGCACCAGGTTCGATTACTCCAACTCCAACTACTTGCTGCTCGGCGAGATTGTCCACCGCGCATCGGGACAACCGCTGC
CTGAGTTCCTCAGCGCCGAGATCTTTCAACCGCTTGGTCTGGCCATGGTGGTGGATCCGGTCGGGAAGGTTCCCAACAAA
GCCGTGTCATATGAGAAGGGCACTGGTGGAAACCGGTCCGAGTACCGGGTGGGCAATCCGGCCTGGGAGCAGATCGGCGA
CGGTGGCATCCAGACCACGCCTAGCCAACTGGCCCGGTGGGCGGACAACTACCGGACAGGAAGCGTCGGCGGCCTGAAAC
TGCTCGAAGCACAACTTGCCGGTGCGGTGGAAACCGAACCCGGTGGCGGCGACCGCTACGGCGCCGGAATCGTGTCGCGC
GCCGACGGAACACTCGACCACGCGGGCGCCTGGGCCGGATTCGTCACGGCATTCCACATCAGCAGTGACCGACGGACTTC
GGTGGCCATCAGCTGCAACACCGACAAGCCGGACCCGGTGGCCATGGCCGATGCGCTGGGGCGCCTTTGGATGTAG

Upstream 100 bases:

>100_bases
GCCGACGCCGGCCCGCGCTCCCGGGCGATCCGCGTGAGCAGCGTAATCTCGTGCGCACGGATTTGCGGCCCGGACTAGCG
CGAAAGATACTGTTGAACAG

Downstream 100 bases:

>100_bases
CGGGGCTACCGCGGTTGGCCGCCGGTACCCAGGCTGCAATCATTCACGGTATGGCGCAACCACCGTCACTCCTCACAACT
GACAATGGCCTACCCTTCGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MDSTVTASIRRMLGLLAATLLLGGCTGQHTTRTAASTTYTPHIKASSQDVLDGAINADEPGCSAAVGVEGKVIWSGVRGI
ADLASGAKITTDTVFDIASVSKQFTATAILLLVEAGKLTLDDPISQYVPELPDWAQTVTVEQLMHQTSGIPDYVALLAAR
GYQVSDRTIEAEARQALAAAPELQFKPGTRFDYSNSNYLLLGEIVHRASGQPLPEFLSAEIFQPLGLAMVVDPVGKVPNK
AVSYEKGTGGNRSEYRVGNPAWEQIGDGGIQTTPSQLARWADNYRTGSVGGLKLLEAQLAGAVETEPGGGDRYGAGIVSR
ADGTLDHAGAWAGFVTAFHISSDRRTSVAISCNTDKPDPVAMADALGRLWM

Sequences:

>Translated_371_residues
MDSTVTASIRRMLGLLAATLLLGGCTGQHTTRTAASTTYTPHIKASSQDVLDGAINADEPGCSAAVGVEGKVIWSGVRGI
ADLASGAKITTDTVFDIASVSKQFTATAILLLVEAGKLTLDDPISQYVPELPDWAQTVTVEQLMHQTSGIPDYVALLAAR
GYQVSDRTIEAEARQALAAAPELQFKPGTRFDYSNSNYLLLGEIVHRASGQPLPEFLSAEIFQPLGLAMVVDPVGKVPNK
AVSYEKGTGGNRSEYRVGNPAWEQIGDGGIQTTPSQLARWADNYRTGSVGGLKLLEAQLAGAVETEPGGGDRYGAGIVSR
ADGTLDHAGAWAGFVTAFHISSDRRTSVAISCNTDKPDPVAMADALGRLWM
>Mature_371_residues
MDSTVTASIRRMLGLLAATLLLGGCTGQHTTRTAASTTYTPHIKASSQDVLDGAINADEPGCSAAVGVEGKVIWSGVRGI
ADLASGAKITTDTVFDIASVSKQFTATAILLLVEAGKLTLDDPISQYVPELPDWAQTVTVEQLMHQTSGIPDYVALLAAR
GYQVSDRTIEAEARQALAAAPELQFKPGTRFDYSNSNYLLLGEIVHRASGQPLPEFLSAEIFQPLGLAMVVDPVGKVPNK
AVSYEKGTGGNRSEYRVGNPAWEQIGDGGIQTTPSQLARWADNYRTGSVGGLKLLEAQLAGAVETEPGGGDRYGAGIVSR
ADGTLDHAGAWAGFVTAFHISSDRRTSVAISCNTDKPDPVAMADALGRLWM

Specific function: Hydrolyzes N-terminal residues in D-amino acid- containing peptides [H]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S12 family [H]

Homologues:

Organism=Homo sapiens, GI26051233, Length=116, Percent_Identity=40.5172413793103, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI26051231, Length=116, Percent_Identity=40.5172413793103, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87082101, Length=203, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786574, Length=270, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790593, Length=228, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533026, Length=353, Percent_Identity=27.1954674220963, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17550934, Length=272, Percent_Identity=28.3088235294118, Blast_Score=85, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR009090
- InterPro:   IPR012856
- InterPro:   IPR012857 [H]

Pfam domain/function: PF00144 Beta-lactamase; PF07930 DAP_B; PF07932 DAP_C [H]

EC number: =3.4.11.19 [H]

Molecular weight: Translated: 39062; Mature: 39062

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTVTASIRRMLGLLAATLLLGGCTGQHTTRTAASTTYTPHIKASSQDVLDGAINADEP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
GCSAAVGVEGKVIWSGVRGIADLASGAKITTDTVFDIASVSKQFTATAILLLVEAGKLTL
CCCEEECCCCEEEEHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
DDPISQYVPELPDWAQTVTVEQLMHQTSGIPDYVALLAARGYQVSDRTIEAEARQALAAA
CCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
PELQFKPGTRFDYSNSNYLLLGEIVHRASGQPLPEFLSAEIFQPLGLAMVVDPVGKVPNK
CCCEECCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCC
AVSYEKGTGGNRSEYRVGNPAWEQIGDGGIQTTPSQLARWADNYRTGSVGGLKLLEAQLA
CCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHC
GAVETEPGGGDRYGAGIVSRADGTLDHAGAWAGFVTAFHISSDRRTSVAISCNTDKPDPV
CCEECCCCCCCCCCCCEEECCCCCHHHCCHHHHHHEEEEECCCCCEEEEEEECCCCCCCH
AMADALGRLWM
HHHHHHHHHCC
>Mature Secondary Structure
MDSTVTASIRRMLGLLAATLLLGGCTGQHTTRTAASTTYTPHIKASSQDVLDGAINADEP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
GCSAAVGVEGKVIWSGVRGIADLASGAKITTDTVFDIASVSKQFTATAILLLVEAGKLTL
CCCEEECCCCEEEEHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
DDPISQYVPELPDWAQTVTVEQLMHQTSGIPDYVALLAARGYQVSDRTIEAEARQALAAA
CCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
PELQFKPGTRFDYSNSNYLLLGEIVHRASGQPLPEFLSAEIFQPLGLAMVVDPVGKVPNK
CCCEECCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCC
AVSYEKGTGGNRSEYRVGNPAWEQIGDGGIQTTPSQLARWADNYRTGSVGGLKLLEAQLA
CCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHC
GAVETEPGGGDRYGAGIVSRADGTLDHAGAWAGFVTAFHISSDRRTSVAISCNTDKPDPV
CCEECCCCCCCCCCCCEEECCCCCHHHCCHHHHHHEEEEECCCCCEEEEEEECCCCCCCH
AMADALGRLWM
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA