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The map label for this gene is 148823116

Identifier: 148823116

GI number: 148823116

Start: 2159215

End: 2159646

Strand: Direct

Name: 148823116

Synonym: TBFG_11933

Alternate gene names: NA

Gene position: 2159215-2159646 (Clockwise)

Preceding gene: 148823115

Following gene: 148823125

Centisome position: 48.8

GC content: 64.58

Gene sequence:

>432_bases
ATGCGCACTGTCGCGATTGGACCAGGTGCCGGTCCTTCGAGCACACGGCCGAGTTCGCAACCCAGTGACCTGCATAGCGG
CCTACGCGCGGTTACCGAGTGCACCGGCTCAGCGGTGGTCGTTCATGTGGGCGGCGACATCGACGCCAGTAACGAGGTCG
CTTGGCAGCGTCTGGTGAGCAAGAGCGCCGCTATCGCCATCGCGCCGGGTCCGTTCGTCATCGACATTCGGGACCTCGAC
TTCATGGGATCATGTGCATACGCTGTGTTGGCCCAGGAGTCGGTGCGGTGTCGCCGGCGCGGGGTGAATATGCGGTTGGT
GAGTAACCAGCCGATCGTGGCCCGCACCATTGCCGCGTGCGGACTGCGGCGACTAATTCCGCTGTATGCAACGGTCGAGA
CCGCACTGGCGCCGCCTCCCAGCGCGCATTGA

Upstream 100 bases:

>100_bases
AAGACAGGCACCCTGTCTTCGGCGTGATGACGCTGACCTCCCGCCCTCCAATACGCCGGACGGCAGCACCTAACAGCACA
CGACGACGGGACTGCAAATG

Downstream 100 bases:

>100_bases
CCGACCCATTAACCGACCGGTGCCACCCAACCCGCCATGGTGTCGGGTTAACCGCCGCCGACAAGATTGACCACCTCCCG
CGCACAACCCCATGACAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRTVAIGPGAGPSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGPFVIDIRDLD
FMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAACGLRRLIPLYATVETALAPPPSAH

Sequences:

>Translated_143_residues
MRTVAIGPGAGPSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGPFVIDIRDLD
FMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAACGLRRLIPLYATVETALAPPPSAH
>Mature_143_residues
MRTVAIGPGAGPSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGPFVIDIRDLD
FMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAACGLRRLIPLYATVETALAPPPSAH

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 14944; Mature: 14944

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVAIGPGAGPSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVS
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
KSAAIAIAPGPFVIDIRDLDFMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAAC
CCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
GLRRLIPLYATVETALAPPPSAH
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRTVAIGPGAGPSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVS
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
KSAAIAIAPGPFVIDIRDLDFMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAAC
CCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
GLRRLIPLYATVETALAPPPSAH
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]