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The map label for this gene is yfdE [H]

Identifier: 148823077

GI number: 148823077

Start: 2121259

End: 2123667

Strand: Direct

Name: yfdE [H]

Synonym: TBFG_11894

Alternate gene names: 148823077

Gene position: 2121259-2123667 (Clockwise)

Preceding gene: 148823073

Following gene: 148823078

Centisome position: 47.94

GC content: 66.63

Gene sequence:

>2409_bases
GTGCCCGAACGATTGCTCGATGCCGTGCGTGTGCTCGACTTGTCCGACGGCTGTTCTGCTGGAGGCACCGATATGGTGAC
ACGACTGCTCGCCGACCTGGGCGCAGACGTTCTCAAGGTGGAACCCCCCGGCGGCAGCCCAGGACGCCACGTGCGGCCCA
CGCTGGCCGGCACCAGCATCGGGTTCGCCATGCACAACGCGAACAAACGCAGCGCAGTGCTCAACCCGCTCGACGAGAGC
GACCGTCGGCGGTTCTTGGACCTCGCCGCCAGCGCCGACATCGTCGTCGACTGTGGTCTTCCGGGACAGGCCGCCGCGTA
CGGGGCATCGTGTGCCGAGTTGGCCGATCGCTACCGACACCTGGTGGCGCTGTCGATCACCGACTTTGGCGCTGCCGGTC
CGCGGTCGTCATGGCGCGCGACCGATCCGGTGCTGTACGCGATGAGTGGTGCTCTCTCGCGGTCGGGCCCTACCGCCGGC
ACGCCGGTACTGCCGCCGGACGGTATCGCTTCGGCAACCGCAGCGGTGCAGGCAGCCTGGGCCGTACTGGTCGCCTATTT
CAACCGATTACGTTGTGGTACTGGGGATTACATCGACTTCTCCCGGTTTGACGCCGTCGTTATGGCGTTGGATCCCCCCT
TCGGGGCGCACGGGCAGGTCGCAGCCGGCATCCGCAGCACCGGGCGATGGCGGGGACGGCCCAAGAACCAGGACGCTTAC
CCGATTTATCCGTGCCGGGACGGCTACGTACGGTTCTGCGTGATGGCGCCGCGGCAGTGGCGCGGGCTGCGCCGCTGGTT
GGGGGAGCCCGAAGATTTTCAGGACCCCAAGTACGACGTGATCGGCGCACGTTTGGCCGCATGGCCGCAGATCAGCGTGT
TGGTCGCGAAGTTGTGCGCCGAGAAGACCATGAAGGAGTTGGTGGCAGCCGGCCAAGCGCTCGGGGTTCCCATTACCGCG
GTGCTGACACCGTCGAGAATCCTGGCCTCCGAACACTTCCAGGCGGTGGGTGCGATCACCGATGCCGAGCTCGTTCCGGG
GGTGCGCACCGGGGTGCCTACCGGATACTTCGTTGTCGACGGGAAGCGCGCCGGTTTCCGTACTCCGGCCCCCGCCGCGG
GGCAGGACGAACCGCGCTGGCTCGCGGATCCAGCGCCGGTGCCCCCACCCTCAGGCCGGGTCGGCGGCTATCCATTCGAA
GGTCTGCGGATTCTTGATCTGGGCATCATCGTGGCCGGCGGCGAGCTCAGCCGGCTGTTCGGCGACTTGGGCGCCGAGGT
CATCAAGGTCGAAAGTGCCGACCACCCCGACGGGTTGCGGCAGACCCGAGTCGGGGATGCGATGAGTGAATCATTCGCGT
GGACCCATCGCAATCACCTCGCGCTGGGCCTGGACCTGCGCAACAGCGAGGGCAAAGCGATCTTCGGTCGCCTGGTCGCT
GAATCCGACGCGGTGTTCGCCAACTTCAAACCGGGAACCCTTACCTCACTTGGGTTTTCCTACGATGTACTGCACGCCTT
CAACCCCCGGATCGTGCTCGCCGGGAGTAGTGCATTCGGGAACCGAGGGCCGTGGAGCACCCGGATGGGCTACGGGCCAC
TGGTGCGCGCCGCCACCGGGGTCACCCGTGTTTGGACATCCGATGAGGCGCAGCCGGACAACTCTCGGCATCCCTTCTAC
GACGCGACGACGATCTTCCCCGACCACGTTGTCGGGCGGGTCGGTGCCCTGCTCGCGCTGGCGGCCCTGATCCACCGCGA
TCGAACTGGCGGCGGAGCCCACGTCCACATCTCCCAGGCCGAAGTCGTCGTCAATCAGCTAGACACCATGTTCGTTGCCG
AGGCCGCCCGAGCGACCGACGTTGCCGAGATCCACCCGGACACCAGTGTGCATGCGGTCTACCCTTGTGCTGGCGACGAC
GAATGGTGCGTCATCTCAATCCGCTCCGACGATGAATGGCGTCGCGCGACATCTGTTTTCGGCCAGCCTGAATTGGCGAA
CGACCCACGCTTCGGGGCAAGCCGGTCACGCGTGGCCAACCGTTCGGAGTTGGTGGCCGCAGTGTCGGCCTGGACCAGCA
CCCGTACCCCGGTGCAAGCGGCCGGCGCGCTGCAGGCGGCCGGAGTTGCGGCCGGCCCGATGAATCGCCCGTCGGATATC
CTCGAGGATCCCCAGCTGATCGAGCGAAACCTGTTCCGCGACATGGTGCATCCGCTGATCGCCCGTCCGCTGCCCGCCGA
GACGGGTCCGGCTCCGTTTCGTCACATTCCGCAGGCACCCCAACGCCCGGCGCCGCTGCCCGGACAGGACAGCGTTCAGA
TCTGCCGCAAGCTGCTCGGCATGACCGCGGACGAGACCGAACGCCTAATCAACGAGCGCGTAATGTTCGGGCCGGCCGTC
ACTGCCTAA

Upstream 100 bases:

>100_bases
GTCGTCCCTTCGCTCGGCGGGCCTTAGCCGCCGTCCAATGCGGTCGCGCCCGTGTAGTCACGGTAGCCGCGAACGCCGAT
GAAACAGCTACGGTGTGCAC

Downstream 100 bases:

>100_bases
GTGGTCTCGCCGGTGTCGTTCGTCGACGGTCGGCTGATTGCCCTTCCGGCTCCGAGATCGACGTTTTGCCCGCCTGTTCG
TGCTTTATCTGCGAAGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 802; Mature: 801

Protein sequence:

>802_residues
MPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDES
DRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAG
TPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAY
PIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITA
VLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFE
GLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVA
ESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFY
DATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDD
EWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI
LEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAV
TA

Sequences:

>Translated_802_residues
MPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDES
DRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAG
TPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAY
PIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITA
VLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFE
GLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVA
ESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFY
DATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDD
EWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI
LEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAV
TA
>Mature_801_residues
PERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESD
RRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGT
PVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYP
IYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAV
LTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEG
LRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAE
SDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYD
ATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDE
WCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDIL
EDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVT
A

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=389, Percent_Identity=24.9357326478149, Blast_Score=137, Evalue=5e-32,
Organism=Homo sapiens, GI300863124, Length=416, Percent_Identity=23.5576923076923, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI300863126, Length=150, Percent_Identity=32.6666666666667, Blast_Score=84, Evalue=5e-16,
Organism=Escherichia coli, GI87082093, Length=351, Percent_Identity=26.7806267806268, Blast_Score=131, Evalue=2e-31,
Organism=Escherichia coli, GI1788717, Length=415, Percent_Identity=23.1325301204819, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI1786222, Length=408, Percent_Identity=22.3039215686275, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648431, Length=408, Percent_Identity=25, Blast_Score=130, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 85656; Mature: 85525

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSI
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEE
GFAMHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRH
EEEEECCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHHHH
LVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAW
EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAY
HHHHHHHHHHCCCCCCCCCHHHHCEEEEEECCCCCCCCCCHHCHHCCCCCCCCCCCCCCC
PIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCA
EEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
EKTMKELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVD
HHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEEEC
GKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHHHH
GDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVA
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEECCCEEEEEEEEECCCCCEEHHHHHH
ESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATG
CCCCEEEECCCCCEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC
VTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQA
CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHH
EVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVF
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHC
GQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCHHH
LEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLG
HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHC
MTADETERLINERVMFGPAVTA
CCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSI
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEE
GFAMHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRH
EEEEECCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHHHH
LVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAW
EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAY
HHHHHHHHHHCCCCCCCCCHHHHCEEEEEECCCCCCCCCCHHCHHCCCCCCCCCCCCCCC
PIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCA
EEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
EKTMKELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVD
HHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEEEC
GKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHHHH
GDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVA
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEECCCEEEEEEEEECCCCCEEHHHHHH
ESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATG
CCCCEEEECCCCCEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC
VTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQA
CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHH
EVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVF
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHC
GQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCHHH
LEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLG
HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHC
MTADETERLINERVMFGPAVTA
CCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]