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The map label for this gene is ureD1 [H]

Identifier: 148823064

GI number: 148823064

Start: 2109194

End: 2109838

Strand: Direct

Name: ureD1 [H]

Synonym: TBFG_11881

Alternate gene names: 148823064

Gene position: 2109194-2109838 (Clockwise)

Preceding gene: 148823063

Following gene: 148823068

Centisome position: 47.67

GC content: 67.6

Gene sequence:

>645_bases
ATGGAGTCTAGTGTTCTGGTGGTCGCGTCGCCGAATCGGTTGCCGCGCATCGACTGTCGGGGCGGTGTCCAGGCACGCCG
AACCGCGCCCGACACGGTGCACCTGGTGTCGGCGGCCGCGACCCCGCTGGGCGGTGACACCATGAGAATCCGGGTGATCG
TGGAACGGGGTGCCCAGCTACGGCTGCGTAGTGCCGCCGCGACGGTGGCCTTGCCCGGCGTGGATACCCTGACGTCGCAT
GCTCACTGGGAGATCGACGTGACCGGCACCCTGGATGTGGACCTGGAGCCGACGGTCGTCGCCGCCTCAGCCCGGCATCT
GTCGCATGCCACCTTGCGCCTGCACGACGACGGTCGGGTCCGCTTGCGCGAGCGCGTGCAGATTGGCAGATGCAATGAGC
GCGAAGGATTTTGGTCGTCATCGCTGCAGGCCGATCGGCATGGTCGTCCCCTGCTGCGGCACCGGGTGGAACTGGGTGCC
GGGTCTTTGGCCGACGACGTCATTGCGGCGCCGCGCGCCACTATCAGCGAGCTGCGCTATCCGGCGACGGCATTCACCGA
CGCCATCGACGCACGGTCGACCGTTTTGGCGTTGGCGGGTGGCGGAACACTGAGTACCTGGCAGGCTGACCGGTTGCCTG
GCTAA

Upstream 100 bases:

>100_bases
GACGCGGTGCGCGACGGCCGCCCGACGGTGCTGCAATCGTTGACCGAGGACCCAGCTGCCAGCGATGTCGTGGCCTGGGT
TCGTAGTCAACTGGCCGCCG

Downstream 100 bases:

>100_bases
CGCTAGCTGGCCACCTTAGCGCTTGCCGCTGAGCCCTGCGCCTCGGCGGCCAGCTCGGCCAGCTGTTCGAGCCGCGTTCG
CGCAAATGCCTGCTGGTCGG

Product: urease accessory protein ureD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MESSVLVVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAAATVALPGVDTLTSH
AHWEIDVTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGA
GSLADDVIAAPRATISELRYPATAFTDAIDARSTVLALAGGGTLSTWQADRLPG

Sequences:

>Translated_214_residues
MESSVLVVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAAATVALPGVDTLTSH
AHWEIDVTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGA
GSLADDVIAAPRATISELRYPATAFTDAIDARSTVLALAGGGTLSTWQADRLPG
>Mature_214_residues
MESSVLVVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAAATVALPGVDTLTSH
AHWEIDVTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGA
GSLADDVIAAPRATISELRYPATAFTDAIDARSTVLALAGGGTLSTWQADRLPG

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 22950; Mature: 22950

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSVLVVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQL
CCCCEEEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCE
RLRSAAATVALPGVDTLTSHAHWEIDVTGTLDVDLEPTVVAASARHLSHATLRLHDDGRV
EEECCEEEEEECCCHHHCCCCEEEEEEEEEEECCCCCEEEEECHHCCEEEEEEEECCCCE
RLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGAGSLADDVIAAPRATISELRY
EEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCC
PATAFTDAIDARSTVLALAGGGTLSTWQADRLPG
CHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCC
>Mature Secondary Structure
MESSVLVVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQL
CCCCEEEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCE
RLRSAAATVALPGVDTLTSHAHWEIDVTGTLDVDLEPTVVAASARHLSHATLRLHDDGRV
EEECCEEEEEECCCHHHCCCCEEEEEEEEEEECCCCCEEEEECHHCCEEEEEEEECCCCE
RLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGAGSLADDVIAAPRATISELRY
EEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCC
PATAFTDAIDARSTVLALAGGGTLSTWQADRLPG
CHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA