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The map label for this gene is 148822991

Identifier: 148822991

GI number: 148822991

Start: 2016935

End: 2017495

Strand: Reverse

Name: 148822991

Synonym: TBFG_11804

Alternate gene names: NA

Gene position: 2017495-2016935 (Counterclockwise)

Preceding gene: 148822992

Following gene: 148822988

Centisome position: 45.6

GC content: 64.71

Gene sequence:

>561_bases
GTGCCGGGTAACGATTGGATCGTGGGCGGCAACCGCCGCACGATCGCTGCCGAACGGATCTACGCCGCCGCAACCGACCT
CATTACGCGCTACGGGCTCAACGCACTCGACATCGACAAATTAGCCCGCGAGGTCCACTGCTCCCGAGCGACCATCTACC
GCCGTGCCGGCGGCAAGGCCCAGATCCGGGATGTCGTTCTGACCCGGGCCGCGGCCCGGATCGCCGACGGCGTGCGCTCG
GATGTCGAAACTCTGCGGGGGCGGGAGCGAGTCGTCGCGGCGATCCTGTTATCGCTTCAGCGAATCCGATCCGACCCGCT
GGGCAAGCTCATGTTCGGCTCGATCCACGGTGGCGCCGGTGAATTGGCCTGGCTCACCGAGTCACCGTTGCTTGCGGACT
TTGCTACCGAGCTCACCGGCATAGCCGGCGGTGATCCGCAAGGCGCGAAATGGGTGGTACGCGTGGTGCTCTCACTGATG
TATTGGCCAGCTGAGAACGACGAAGCCGAACGCCGGCTGGTCGAAAAATACGTGGCGCCAGCGTTTGCCGAGCAAAGCTG
A

Upstream 100 bases:

>100_bases
CGCGGGAGGCGGACCTGCAACTACGATGAGAATAAGTAAGGCTTGTGTCTCACTATGAGAAGAATCGCTCTTCGCCTCTC
GATGGAAATGCGCCTGACCA

Downstream 100 bases:

>100_bases
AACCTCACTCGTCACCGAAGCTTTCCCACAGGTCCGCCAAGAACCCCGCCAGGTGGTTCATCTCCTGCGCGCAGTACACC
AGCAGATTACGCGCGGTCGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKAQIRDVVLTRAAARIADGVRS
DVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAGELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLM
YWPAENDEAERRLVEKYVAPAFAEQS

Sequences:

>Translated_186_residues
MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKAQIRDVVLTRAAARIADGVRS
DVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAGELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLM
YWPAENDEAERRLVEKYVAPAFAEQS
>Mature_185_residues
PGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKAQIRDVVLTRAAARIADGVRSD
VETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAGELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMY
WPAENDEAERRLVEKYVAPAFAEQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20315; Mature: 20183

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP
CEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AFAEQS
HHCCCC
>Mature Secondary Structure 
PGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP
CEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AFAEQS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]