| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822842
Identifier: 148822842
GI number: 148822842
Start: 1835963
End: 1837660
Strand: Reverse
Name: 148822842
Synonym: TBFG_11651
Alternate gene names: NA
Gene position: 1837660-1835963 (Counterclockwise)
Preceding gene: 148822844
Following gene: 148822839
Centisome position: 41.53
GC content: 64.84
Gene sequence:
>1698_bases ATGTTGCTGTGCAAGGCTTTTTGGGAAATGCATGCGAGTCGTCCCGGCGCACCGCCGCACGCCGGGCTGCCCAGTCGCCG AACCGCCGGTGACCAGGATCATCGCGCGGACCCTAAGGTGACCCGCATCATGTCCGCCTCCACTCTGGAGCAGCCCGCGG CAGCACACGTCGACGAGTTGGTGGCGCGGATGCGCGGCCGGCTGCTCGACCCGCTGGCGATTGCAGTGCTGGCCGCGGTC ATCAGCGGCGCCTGGGCAAGCAGGCCATCGTTGTGGTTCGACGAGGGGGCAACGATCTCGGCTTCAGCCAGCCGGACATT GCCAGAGCTATGGAGTCTGCTGGGCCATATCGACGCCGTGCACGGCCTGTACTACCTGTTGATGCATGGCTGGTTCGCCA TATTTCCGCCCACCGAATTATGGTCGCGGCTTCCCAGCTGCCTGGCCATTGGAGCGGCCGCCGCCGGCGTGGTGGTTTTT GCCAAACAGTTTTCGGGACGCACCACGGCGGTGTGTGCGGGAGCCGTGTTCGCGATTCTGCCCAGGGTGACGTGGGCCGG AATCGAAGCACGCTCCTCCGCGCTGTCGGTAGCAGCCGCCGTCTGGCTGACCGTATTACTCGTGGCCGCGGTGCGGTGCA ACACCCAGCGGCGGTGGCTGCTCTACGCGCTGGTTTTGATGCTGTCGATCTTGGTCAGTATCAACCTGGCCCTGTTGGTA CCGGCCTATGCGACGATGGTGCCGCTGCTGGCGTCCGGGAAATCACGCAAATCTCCCGTGATCTGGTGGACGGTCGTCAC GGCAGCCGCGCTCGGGGCCATGACACCGTTCATACTGTTCGCCCACGGCCAGGTTTGGCAGGTCGGGTGGATCGCAGGGT TGAACAGAAACATCATTCTCGACGTCATACACCGCCAGTATTTCGATCACAGTGTTCCGTTCGCCATCCTCGCGGGCCTC ATCGTCGCTGCCGGCATCGCGGCGCATCTGGCCGGAGCTCGTGGACCCGGTGGCGATACCCACCGGCTCGTGCTCGTCAG CGCAGCCTGGATCGTCGTGCCCACCGCCGTCGTCCTCATCTACTCGGCGACCGTCGAACCGATCTACTACCCGCGCTACC TGATCCTCACCGCCCCCGCCGCGGCCGTCATCCTGGCGGTTTGCGTCGTCACCATCGCCCGCAAGCCGTGGCTCATCGCC GGGGTCGTGTTTCTCCTTGCCGCCGCAGCGTTTCCGAACTACTTCTTCACACAGCGGGGGCCGTACGCGAAAGAGGGCTG GGATTACAGCCAGGTGGCAGATGTCATCAGCGCCCATGCCAAGCCCGGGGATTGCCTGCTGGTGGACAACACCGCGGGTT GGCGACCCGGGCCCATCCGCGCCCTGCTGGCCACCCGGCCGGCGGCGTTCCGGTCGCTGATTGACGTCGAGCGCGGCACC TACGGCCCCAAGGTCGGCACTTTGTGGGATGGCCATGTCGCTGTGTGGCTTACGACGGCCAAGATCGACAAGTGCCCCAC GCTGTGGACGATAGCCAATCGTGACAAGTCGTTGCCCGATCATCAGGTCGGCGAAATGTTGTCACCGGGAACAGGCTTCG GGCGCACGCCCGTATACCGGTTCCCGAGCTACCTCGGCTTCCGCATCGTCGAGCGCTGGCAGTTCCACTACTCGCAGGTG GTCAAGTCAACGCGGTAA
Upstream 100 bases:
>100_bases CGCAACGGCGTGGCGCAACCCTCATTTGCCCGATCGCGGTGAACCAGCCGACAATGGTGGCGATGACACGACGATTCAAT ACGCACGCTAATCGCGGAAA
Downstream 100 bases:
>100_bases GCGCCGGTCGCGGTGCGTGGCCTGGTAGGAGGCGATGACACCAGCGGCGGCCAGCACCGTAAATGCCATGTATAGCCCAC GAGCCGCCGCCACTTCGCCG
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MLLCKAFWEMHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLLDPLAIAVLAAV ISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVF AKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLV PAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGL IVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIA GVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGT YGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQV VKSTR
Sequences:
>Translated_565_residues MLLCKAFWEMHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLLDPLAIAVLAAV ISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVF AKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLV PAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGL IVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIA GVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGT YGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQV VKSTR >Mature_565_residues MLLCKAFWEMHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLLDPLAIAVLAAV ISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVF AKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLV PAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGL IVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIA GVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGT YGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQV VKSTR
Specific function: Unknown
COG id: COG5305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61158; Mature: 61158
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLCKAFWEMHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDEL CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH VARMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAV HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCEEECCHHCCHHHHHHHHHHHHHH HGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAIL HHHHHHHHHCCEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH PRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH PAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIIL HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHEEECCCEEEEHHHHCCCCCHHH DVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH YSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRG HHCCCCCEECCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCC PYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGT CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC YGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYR CCCCCCCEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCHHH FPSYLGFRIVERWQFHYSQVVKSTR CHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLCKAFWEMHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDEL CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH VARMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAV HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCEEECCHHCCHHHHHHHHHHHHHH HGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAIL HHHHHHHHHCCEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH PRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH PAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIIL HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHEEECCCEEEEHHHHCCCCCHHH DVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH YSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRG HHCCCCCEECCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCC PYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGT CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC YGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYR CCCCCCCEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCHHH FPSYLGFRIVERWQFHYSQVVKSTR CHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA