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The map label for this gene is whiA [H]

Identifier: 148822643

GI number: 148822643

Start: 1602247

End: 1603224

Strand: Direct

Name: whiA [H]

Synonym: TBFG_11452

Alternate gene names: 148822643

Gene position: 1602247-1603224 (Clockwise)

Preceding gene: 148822642

Following gene: 148822645

Centisome position: 36.21

GC content: 68.81

Gene sequence:

>978_bases
ATGACGACCGATGTCAAAGACGAGCTGAGCCGACTGGTGGTGAAGTCCGTCAGCGCGCGGCGCGCGGAGGTCACCTCTCT
GCTGCGATTCGCCGGCGGGTTGCACATCGTGGGCGGCCGCGTGGTGGTCGAAGCCGAGCTGGACCTGGGCAGTATCGCAC
GGCGGCTGCGTAAGGAGATCTTCGAGCTCTACGGCTACACGGCGGTGGTGCATGTGTTGTCGGCCAGCGGGATTCGCAAG
AGCACCCGCTACGTGCTGCGGGTCGCCAACGACGGCGAGGCGTTGGCACGCCAAACCGGACTGCTTGACATGCGCGGTCG
TCCCGTGCGGGGTCTGCCGGCCCAGGTCGTCGGCGGCAGCATCGATGACGCTGAAGCTGCGTGGCGAGGAGCATTTTTGG
CGCACGGGTCGCTGACTGAGCCGGGACGCTCCTCGGCGTTGGAGGTCAGTTGCCCGGGCCCGGAGGCCGCGCTGGCGCTG
GTGGGTGCGGCACGCCGGCTTGGGGTCGGCGCCAAGGCTCGTGAGGTGCGCGGTGCCGATCGCGTGGTGGTGCGCGACGG
TGAGGCGATCGGCGCACTGCTGACCCGGATGGGGGCCCAAGACACCCGGCTGGTCTGGGAGGAGCGGCGGCTGCGTCGTG
AGGTGCGTGCGACGGCCAACCGGCTCGCCAATTTCGACGACGCCAATCTGCGCCGCTCGGCGCGGGCCGCGGTTGCCGCG
GCCGCCCGGGTGGAGCGTGCCTTGGAGATCCTCGGCGATACGGTGCCCGAGCACTTGGCCTCGGCCGGCAAATTGCGTGT
CGAGCACCGGCAGGCGTCGCTGGAGGAGCTGGGCCGGCTTGCCGATCCTCCGATGACGAAAGACGCTGTAGCCGGACGTA
TTCGGCGATTGTTGTCGATGGCGGATCGTAAGGCGAAGGTGGACGGCATCCCCGATACGGAGTCCGTAGTGACGCCCGAT
CTGCTGGAAGACGCCTAG

Upstream 100 bases:

>100_bases
GGGTGTGTGCGCGCGACGTCGGCGCGTCGGAGCCTCCGGTGGCGGCCACACAGGAGATACCGATCGACGGTGGACGACCG
AGGGGTGACGACGCGTGGCG

Downstream 100 bases:

>100_bases
CGGGCTGACTTACTTCGGTGCCACGCACACCAATTGGCTGCTTGCCGGGGGTATTGCTGGCCCTTCGATTTCCTCGGGCG
GCTGCAGAGAGACTGACGCG

Product: transcriptional regulatory protein whiA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEIFELYGYTAVVHVLSASGIRK
STRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGSIDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALAL
VGAARRLGVGAKAREVRGADRVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA
AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRKAKVDGIPDTESVVTPD
LLEDA

Sequences:

>Translated_325_residues
MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEIFELYGYTAVVHVLSASGIRK
STRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGSIDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALAL
VGAARRLGVGAKAREVRGADRVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA
AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRKAKVDGIPDTESVVTPD
LLEDA
>Mature_324_residues
TTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEIFELYGYTAVVHVLSASGIRKS
TRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGSIDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALV
GAARRLGVGAKAREVRGADRVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAAA
ARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRKAKVDGIPDTESVVTPDL
LEDA

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 34934; Mature: 34802

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHHHHHHH
FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS
HHHHHHHHHHHHHHHCCCHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCC
IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCC
RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA
EEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM
HHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ADRKAKVDGIPDTESVVTPDLLEDA
HHHHHCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHHHHHHH
FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS
HHHHHHHHHHHHHHHCCCHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCC
IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCC
RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA
EEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM
HHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ADRKAKVDGIPDTESVVTPDLLEDA
HHHHHCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA