| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822251
Identifier: 148822251
GI number: 148822251
Start: 1168860
End: 1169267
Strand: Reverse
Name: 148822251
Synonym: TBFG_11060
Alternate gene names: NA
Gene position: 1169267-1168860 (Counterclockwise)
Preceding gene: 148822252
Following gene: 148822250
Centisome position: 26.43
GC content: 64.46
Gene sequence:
>408_bases GTGACGCGAGTGGGTGTGATTTCGGACGAGTTCTGGGCCGTGGTCGAGCCGTTGATGCCGTCGCATGAGGGCAAGCCCGG CAGACGGTTTAGCGATCACCGGCTTATCCTGGAAGGGATCGCGTGGCGGTTCCGTACGGGAAGTCCGTGGCGGGACCTGC CCGCTGAGTTCGGGCCGTGGCAAACGGTGTGGAAGCGCCATCACCGTTGGTCGCTGGATGGTACCTGCGACGAGGTGTTC GCCCACGTTGCCGCGGTGTTCGGGGTGGACGCTGAGGTGGCCGAGGATATCGAGAAGCTGCTGTCGGTGGATTCCACGAA CGTGCGGGCACACCAGCATTCGGCGGGCGCCTGCTCGGACACGCTCGCCACAGGGGGCACTGTCGGATTACAAGAAATCC GCCGATGA
Upstream 100 bases:
>100_bases CATAGGAGATGCGCCGAACAGGCCAAAGTACTACCGCTGCAGCCCGCGCCTAGGGCGTGTCTCCCAAATTTTTAGGTTAC TGGCCAGCGAGGATTGGCCG
Downstream 100 bases:
>100_bases ACCCGACGATCATGCGATCGGCCGCTCGCGCGGCGGGCTGACCACCAAGATCCATGCCCTGACCGATCAGCGCGAAGCCC CGGTGCGGATCCGGTTGACC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDEVF AHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVGLQEIRR
Sequences:
>Translated_135_residues MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDEVF AHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVGLQEIRR >Mature_134_residues TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDEVFA HVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVGLQEIRR
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15117; Mature: 14986
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH TLATGGTVGLQEIRR HHHCCCCCCHHHHCC >Mature Secondary Structure TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH TLATGGTVGLQEIRR HHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]