| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822243
Identifier: 148822243
GI number: 148822243
Start: 1162686
End: 1163177
Strand: Reverse
Name: 148822243
Synonym: TBFG_11052
Alternate gene names: NA
Gene position: 1163177-1162686 (Counterclockwise)
Preceding gene: 148822244
Following gene: 148822242
Centisome position: 26.29
GC content: 66.67
Gene sequence:
>492_bases ATGCCCGCCCCGATCACCAAGGGTCGGCTCGGTAAGCCGGTCGAGTTTGAGCACAAGGCCCAGGTCGTCGACAACGATGA CGGGATTGTGCTGGATCACACTGTGCAGCAGGGCAACCCACCCGATGCGCCGCAGCTGGCGCCAGCGGTGGCGTGGGTGA AAAAGCGCGCCGGACGCACGCCGCGCACCGTCACCGCCGACCGCGGCTATGGCGAAGCCGCCGTCGACCAGCAGCTCACC GAGGTGGGCGTCAAGAATGTGCTGATCCCGCGCAAAGGCAAACCTTCGCAGGATCGACGCGCCGAAGAACACCGAAAAGC GTTCCGCCGCACCATCAAATGGCGGACCGGATGCGAAGGCCGGATCAGCCACCTCAAACGCGGCTACGGCTGGGACCGCG GCCGGATCGGCGGTCTCGAAGGCACCCGGACCTGGGTCGGACACGGCGTGTTCGCCCACAACCTGGTCACGATCAGCGCC CTCCCCGCATAA
Upstream 100 bases:
>100_bases CTGCTCAACGCGACGCGTCAGATTGTGGCGCAGACCCGCCAGCGGGTCGCGGGCATCACTTCGGACGGGGCGAGTCGACG GGTCAGCCTGCACGACGGTG
Downstream 100 bases:
>100_bases CCGGTCCACCGGGGGCTCCGTATACCCGGAAACCGAGATCCGCTTTCTCACCGCCGAAGCCCGACATCCCGCCCGGTCAC CTTTTCAGGCCGAAGTAACT
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Transposase IS4 Family Protein; Methyl-Accepting Chemotaxis Sensory Transducer
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPAPITKGRLGKPVEFEHKAQVVDNDDGIVLDHTVQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLT EVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISA LPA
Sequences:
>Translated_163_residues MPAPITKGRLGKPVEFEHKAQVVDNDDGIVLDHTVQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLT EVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISA LPA >Mature_162_residues PAPITKGRLGKPVEFEHKAQVVDNDDGIVLDHTVQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTE VGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISAL PA
Specific function: Unknown
COG id: COG3039
COG function: function code L; Transposase and inactivated derivatives, IS5 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17965; Mature: 17833
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPITKGRLGKPVEFEHKAQVVDNDDGIVLDHTVQQGNPPDAPQLAPAVAWVKKRAGRT CCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC PRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTGCEG CCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH RISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISALPA HHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHEEEEEECCC >Mature Secondary Structure PAPITKGRLGKPVEFEHKAQVVDNDDGIVLDHTVQQGNPPDAPQLAPAVAWVKKRAGRT CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC PRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTGCEG CCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH RISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISALPA HHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA