| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822212
Identifier: 148822212
GI number: 148822212
Start: 1122196
End: 1123764
Strand: Reverse
Name: 148822212
Synonym: TBFG_11021
Alternate gene names: NA
Gene position: 1123764-1122196 (Counterclockwise)
Preceding gene: 148822214
Following gene: 148822210
Centisome position: 25.4
GC content: 66.48
Gene sequence:
>1569_bases ATGACCGCCCGGCCCCCAGAATCCTGTGTCCTGGCCAAGGACCGCCCCGAGGAGCCTGTGGTACCCGTCGTCAGCCCCGG CCCGCTGGTGCCGGTCGCGGATTTCGGGCCCCTGGACCGGTTACGCGGCTGGATCGTGACCGGCCTGATCACGCTGCTGG CCACGGTGACCCGGTTCCTGAACCTGGGCTCGCTGACCGATGCCGGCACCCCCATCTTCGACGAGAAGCATTACGCACCC CAGGCCTGGCAGGTGCTGAACAACCATGGGGTGGAAGACAACCCCGGGTACGGCCTGGTGGTTCACCCGCCGGTCGGTAA GCAGCTGATCGCGATCGGGGAGGCCATCTTCGGTTACAACGGATTCGGCTGGCGGTTCACCGGCGCCCTGCTGGGTGTGG TCCTGGTGGCGCTGGTGGTGCGGATCGTGCGGCGGATCAGCCGGTCGACATTGGTCGGCGCCATCGCCGGGGTGCTGCTG ATCTGCGACGGGGTCAGCTTCGTCACCGCGCGGACCGCGCTGCTGGACGGCTTCCTGACGTTCTTCGTCGTCGCGGCGTT CGGCGCGCTCATCGTCGACCGCGATCAGGTTCGCGAACGGATGCACATCGCTCTGCTGGCCGGCCGCAGCGCCGCCACCG TGTGGGGACCGCGGGTGGGTGTGCGCTGGTGGCGGTTCGGCGCCGGGGTGCTGCTGGGATTGGCTTGCGCCACCAAGTGG TCCGGCGTGTACTTCGTGCTGTTCTTCGGCGCGATGGCGCTGGCGTTCGACGTGGCGGCGCGACGTCAGTACCAAGTGCA AAGACCGTGGCTGGGGACAGTGCGGCGTGACGTGCTTCCCAGCGGGTATGCGCTGGGGTTGATCCCGTTCGCGGTCTATC TGGCCACCTACGCTCCGTGGTTCGCGTCCGAGACCGCGATCGATCGGCATGCGGTCGGTCAAGCGGTCGGTCGCAACTCG GTTGTTCCGCTGCCCGACGCCGTGCGCTCGCTCTGGCACTACACCGCCAAAGCGTTCCACTTCCACGCGGGCCTGACGAA TTCCGCAGGCAACTACCACCCTTGGGAATCCAAACCGTGGACCTGGCCCATGTCGTTGCGGCCGGTGCTGTACGCCATCG ACCAGCAAGACGTTGCAGGCTGCGGCGCACAGTCGTGCGTCAAGGCCGAGATGCTGGTCGGCACGCCCGCGATGTGGTGG CTGGCGGTGCCAGTCCTGGCATACGCGGGGTGGCGTATGTTTGTGCGCCGGGACTGGCGTTATGCGGTGGTCCTGGTCGG CTACTGCGCCGGTTGGCTGCCGTGGTTCGCCGACATCGACCGGCAGATGTACTTCTTCTACGCAGCGACCATGGCGCCAT TTCTGGTGATGGGCATTTCGCTGGTTCTCGGCGATATCCTCTATCACCCCGGTCAGGGCTCCGAACGACGCACACTGGGG CTGATCGTCGTCTGCTGCTACGTGGCCCTCGTGGTGACGAACTTTGCGTGGCTGTATCCGGTGCTCACCGGTCTGCCAAT CTCACAACAGACCTGGAACCTGGAGATCTGGCTGCCCAGCTGGCGGTGA
Upstream 100 bases:
>100_bases GGCCGCCAGGCGTGGTGACGCATCCGACGGCTGGCCCAGCGGGGTGGCGCCGAGCAACAGGCGACCAGAGGACATGACGG ACAGCCTACGATCGACACCG
Downstream 100 bases:
>100_bases TCTGCGGCGCCGCCAGGCGCCGAAATCGCCACTCCTAAAGCGGATCGCGGGCGGCCGGACAGGACATGCAGCGGGGCCCG CCACGGCCGGTACCCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MTARPPESCVLAKDRPEEPVVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAP QAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVVLVALVVRIVRRISRSTLVGAIAGVLL ICDGVSFVTARTALLDGFLTFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKW SGVYFVLFFGAMALAFDVAARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNS VVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWW LAVPVLAYAGWRMFVRRDWRYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLG LIVVCCYVALVVTNFAWLYPVLTGLPISQQTWNLEIWLPSWR
Sequences:
>Translated_522_residues MTARPPESCVLAKDRPEEPVVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAP QAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVVLVALVVRIVRRISRSTLVGAIAGVLL ICDGVSFVTARTALLDGFLTFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKW SGVYFVLFFGAMALAFDVAARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNS VVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWW LAVPVLAYAGWRMFVRRDWRYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLG LIVVCCYVALVVTNFAWLYPVLTGLPISQQTWNLEIWLPSWR >Mature_521_residues TARPPESCVLAKDRPEEPVVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAPQ AWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVVLVALVVRIVRRISRSTLVGAIAGVLLI CDGVSFVTARTALLDGFLTFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWS GVYFVLFFGAMALAFDVAARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNSV VPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWWL AVPVLAYAGWRMFVRRDWRYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGL IVVCCYVALVVTNFAWLYPVLTGLPISQQTWNLEIWLPSWR
Specific function: Unknown
COG id: COG1928
COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 39 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 57608; Mature: 57477
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARPPESCVLAKDRPEEPVVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFL CCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NLGSLTDAGTPIFDEKHYAPQAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYN CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCC GFGWRFTGALLGVVLVALVVRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKW HHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHC SGVYFVLFFGAMALAFDVAARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPW CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH FASETAIDRHAVGQAVGRNSVVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPW HCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCC TWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWWLAVPVLAYAGWRMFVRRDWR CCCCCCCCHHEEECCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCH YAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LIVVCCYVALVVTNFAWLYPVLTGLPISQQTWNLEIWLPSWR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC >Mature Secondary Structure TARPPESCVLAKDRPEEPVVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFL CCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NLGSLTDAGTPIFDEKHYAPQAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYN CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCC GFGWRFTGALLGVVLVALVVRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKW HHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHC SGVYFVLFFGAMALAFDVAARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPW CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH FASETAIDRHAVGQAVGRNSVVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPW HCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCC TWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWWLAVPVLAYAGWRMFVRRDWR CCCCCCCCHHEEECCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCH YAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LIVVCCYVALVVTNFAWLYPVLTGLPISQQTWNLEIWLPSWR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]