| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822075
Identifier: 148822075
GI number: 148822075
Start: 968127
End: 969350
Strand: Reverse
Name: 148822075
Synonym: TBFG_10884
Alternate gene names: NA
Gene position: 969350-968127 (Counterclockwise)
Preceding gene: 148822076
Following gene: 148822071
Centisome position: 21.91
GC content: 72.96
Gene sequence:
>1224_bases ATGAGTGGACGCCACCGTAAGCCCACCACATCCAACGTCAGCGTCGCCAAGATCGCCTTTACCGGCGCAGTACTCGGTGG CGGCGGCATCGCCATGGCCGCTCAGGCGACCGCGGCCACCGACGGGGAATGGGATCAGGTGGCCCGCTGCGAGTCGGGCG GCAACTGGTCGATCAACACCGGCAACGGTTACCTCGGTGGCTTGCAGTTCACTCAAAGCACCTGGGCCGCACATGGTGGC GGCGAGTTCGCCCCGTCGGCTCAGCTGGCCAGCCGGGAGCAGCAGATTGCCGTCGGTGAGCGGGTGCTGGCCACCCAGGG TCGCGGCGCCTGGCCGGTGTGCGGCCGCGGGTTATCGAACGCAACACCCCGCGAAGTGCTTCCCGCTTCGGCAGCGATGG ACGCTCCGTTGGACGCGGCCGCGGTCAACGGCGAACCAGCACCGCTGGCCCCGCCGCCCGCCGACCCGGCGCCACCCGTG GAACTTGCCGCTAACGACCTGCCCGCACCGCTGGGTGAACCCCTCCCGGCAGCTCCCGCCGACCCGGCACCACCCGCCGA CCTGGCACCACCCGCGCCCGCCGACGTCGCGCCACCCGTGGAACTTGCCGTAAACGACCTGCCCGCACCGCTGGGTGAAC CCCTCCCGGCAGCTCCCGCCGACCCGGCACCACCCGCCGACCTGGCACCACCCGCGCCCGCCGACCTGGCGCCACCCGCG CCCGCCGACCTGGCGCCACCCGCGCCCGCCGACCTGGCACCACCCGTGGAACTTGCCGTAAACGACCTGCCCGCGCCGCT GGGTGAACCCCTCCCGGCAGCTCCCGCCGAACTGGCGCCACCCGCCGATCTGGCACCCGCGTCCGCCGACCTGGCGCCAC CCGCGCCCGCCGACCTGGCGCCACCCGCGCCCGCCGAACTGGCGCCACCCGCGCCCGCCGACCTGGCACCACCCGCTGCG GTGAACGAGCAAACCGCGCCGGGCGATCAGCCCGCCACAGCTCCAGGCGGCCCGGTTGGCCTTGCCACCGATTTGGAACT CCCCGAGCCCGACCCCCAACCAGCTGACGCACCGCCGCCCGGCGACGTCACCGAGGCGCCCGCCGAAACGCCCCAAGTCT CGAACATCGCCTATACGAAGAAGCTGTGGCAGGCGATTCGGGCCCAGGACGTCTGCGGCAACGATGCGCTGGACTCGCTC GCACAGCCGTACGTCATCGGCTGA
Upstream 100 bases:
>100_bases CCGATGTACGACCGCGGCCGGGTGATCCTCTCCACGGCGAATCCAACCCGAACCCGACAGCTGACCTCGTAGGCGTGTAC CGAGAGGAATTACCTAACGT
Downstream 100 bases:
>100_bases CGGGCTGAGGCCGGACTTTAAACCGAACCCACCCATTCGTCGGTACCGTCCTCGAAGAACTGGTGCTTCCACACGGGAAG CCGCGCCTTGATGGTCTCCA
Product: resuscitation-promoting factor rpfA
Products: NA
Alternate protein names: Transglycosylase Domain-Containing Protein; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfA; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; Transglycosylase Family Protein; M23 Family Secreted Peptidase; Resuscitation-Promoting Factor RpfC; Transglycosylase-Like Domain Protein; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfE; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Secreted Esterase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Vegetative Cell Wall; FHA Domain-Containing Protein; Cell Wall Function Protein; Resuscitation-Promoting Factor Rpfc; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; FG-GAP Repeat Domain-Containing Protein; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; Cell Wall Catabolism Protein; Transglycosylase-Like Domain-Containing Protein; Lipoprotein; M24/M37 Family Peptidase
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGG GEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPV ELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAA VNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSL AQPYVIG
Sequences:
>Translated_407_residues MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGG GEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPV ELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAA VNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSL AQPYVIG >Mature_406_residues SGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGG EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVE LAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPAP ADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAV NEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLA QPYVIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39975; Mature: 39843
Theoretical pI: Translated: 3.66; Mature: 3.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT CCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEHHHCCCCCCHHHHHHHCCCCCEEEEC GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN CCCEECCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA CCCHHHCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECC >Mature Secondary Structure SGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT CCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEHHHCCCCCCHHHHHHHCCCCCEEEEC GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN CCCEECCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA CCCHHHCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA