Click here to switch to the map view.

The map label for this gene is ppe54 [H]

Identifier: 148821550

GI number: 148821550

Start: 427326

End: 427877

Strand: Reverse

Name: ppe54 [H]

Synonym: TBFG_10359

Alternate gene names: 148821550

Gene position: 427877-427326 (Counterclockwise)

Preceding gene: 148821551

Following gene: 148821542

Centisome position: 9.67

GC content: 61.59

Gene sequence:

>552_bases
GTGTCGGTCTGCGTGATCTACATCCCTTTCAAGGGGTGTGTAAAGCATGTCTCGGTCACCATACCCATCACCACCGAACA
TCTCGGCCCCTACGAAATCGATGCCAGCACGATCAACCCCGACCAGCCCATCGACACGGCTTTCACCCAAACCCTCGATT
TCGCCGGCAGCGGCACCGTGGGCGCGTTCCCCTTCGGCTTCGGCTGGCAGCAGAGCCCGGGATTCTTCAACTCGACCACA
ACCCCGTCGTCGGGCTTCTTCAACTCCGGCGCCGGTGGCGCATCGGGCTTCCTCAACGACGCCGCAGCCGCCGTGTCGGG
CCTGGGAAACGTCTTCACCGAGACTTCGGGCTTCTTCAATGCTGGCGGCGTAGGGAATTCGGGCTTCCAAAACTTCGGCA
ACCTGCTGTCGGGCTGGGCGAACCTAGGCAATACCGTCTCCGGTTTCTACAACACGAGCATGCTGGACCTCGCGACCCAA
GCCCTTATCTCCGGCTTCGGCAACCACGGAGCCCGACTCTCCGGCATCCTCAACAACGGTAGCGGACCCTAA

Upstream 100 bases:

>100_bases
GACAGGTTCCAACATTGAAATACCCATCGAGGGCGACATCAACGCCATCACCCAGGACGCGTTCACTATTGACGAATTCG
AAATACCCATCAAGTTGCGG

Downstream 100 bases:

>100_bases
CTCCCCCGCTACGCGCGCTCGCTCACCGGCTGGTGCCAACTGCGCCGTTCGCTCCCCCGCTACGCGCGCTCGCTCACCGG
CTGGTGCCAACTGCGCCGTT

Product: PPE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTVGAFPFGFGWQQSPGFFNSTT
TPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLATQ
ALISGFGNHGARLSGILNNGSGP

Sequences:

>Translated_183_residues
MSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTVGAFPFGFGWQQSPGFFNSTT
TPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLATQ
ALISGFGNHGARLSGILNNGSGP
>Mature_182_residues
SVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTVGAFPFGFGWQQSPGFFNSTTT
PSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLATQA
LISGFGNHGARLSGILNNGSGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002989
- InterPro:   IPR000030 [H]

Pfam domain/function: PF01469 Pentapeptide_2; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 18672; Mature: 18541

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTV
CCEEEEEECCHHHHCEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCC
GAFPFGFGWQQSPGFFNSTTTPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
AGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLATQALISGFGNHGARLSGILNNG
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEECCC
SGP
CCC
>Mature Secondary Structure 
SVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTV
CEEEEEECCHHHHCEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCC
GAFPFGFGWQQSPGFFNSTTTPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
AGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLATQALISGFGNHGARLSGILNNG
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEECCC
SGP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]