Click here to switch to the map view.

The map label for this gene is 148821422

Identifier: 148821422

GI number: 148821422

Start: 274624

End: 275304

Strand: Reverse

Name: 148821422

Synonym: TBFG_10231

Alternate gene names: NA

Gene position: 275304-274624 (Counterclockwise)

Preceding gene: 148821423

Following gene: 148821420

Centisome position: 6.22

GC content: 61.97

Gene sequence:

>681_bases
GTGAGACAGCCGCGCCGGGCGAATGCCATGGGCTTGGCATTGTGCATATATATCGGCTCCTTATTGATATATACTCCGAT
TCATGGCGAAACATCTCGTCGACATCGACGAGCAGGCTTTAAACATGGCTCGTACAGAATTGGGCACGACGACGATCAAA
GACACCGTCAACGCGGCCCTGCGGCAAGCCACGTCTCAGCGAGTTCAACGCGTCGCCGCCGCTCTCGACACGCTGGCCGC
CGCACCGCCAGAGGACCGCGCCGAAGCATGGCGCTGAAATATCTTCTCGACACCAGCGTGATCAAAAGGCTCAGCCGGCC
CGCCGTGCGGCGGGCGGTGGAACCGTTGGCTGAGGCCGGTGCCGTCGCTCGCACGCAAATAACCGACCTTGAAGTCGGGT
ACTCCGCACGCAATGAGACCGAGTGGCAGCGGCTCATGGTGGCATTGAGCGCGTTCGACCTCATCGAATCGACGGCATCG
CATCATCGCCGCGCGCTTGGAATCCAGCGCCTACTCGCTGCGCGTAGTCAGCGCGGTCGCAAAATCCCGGACCTGCTCAT
TGCCGCGGCCGGCGAGGAACACGGGCTGGTCGTTCTACATTACGACGCGGACTTCGATCTCATCGCCGCCGTGACCGGTC
AGCCCTGTCAGTGGATCGTGCCAGCGGGCACGATCGACTAG

Upstream 100 bases:

>100_bases
TCATCCCCGCACTGAAGCAGCACGGCGTCACCGACGAGCAGCTGCACACCATGCTCGTCGACAACCCGCGCCGCATCTTC
GAGCGGCAGGGCGGCTATCA

Downstream 100 bases:

>100_bases
GTGCCCGCCAGGTGTCAGCCGGCCGAGTCAGGGTGCAATCGCGTCCGCCTGAAGTTCGCCGACCGATATGGGTTCGTTGC
GGCGCTCCCAGCGGCGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGPAASHVSASSTRRRRSRHAGR
RTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTAS
HHRRALGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID

Sequences:

>Translated_226_residues
MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGPAASHVSASSTRRRRSRHAGR
RTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTAS
HHRRALGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID
>Mature_226_residues
MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGPAASHVSASSTRRRRSRHAGR
RTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTAS
HHRRALGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25216; Mature: 25216

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEECCCCCHHHHHHCCC
AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG
CHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR
CHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID
CCCHHHEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure
MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEECCCCCHHHHHHCCC
AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG
CHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR
CHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID
CCCHHHEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA