| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148821397
Identifier: 148821397
GI number: 148821397
Start: 242294
End: 243577
Strand: Reverse
Name: 148821397
Synonym: TBFG_10206
Alternate gene names: NA
Gene position: 243577-242294 (Counterclockwise)
Preceding gene: 148821399
Following gene: 148821395
Centisome position: 5.51
GC content: 66.9
Gene sequence:
>1284_bases ATGTATCGCGATTACGGCGCCACCTGCACGGTTACCCTTAAGCACGTGTCGCACGACGCCCCCGCCCGCAACCTCCGCCA GCGCGTGGGGGCACTCCCTCGCACGCGGGTGGGGGCACCCCCCGCTGAGGGCGTACCCCCGTGCGGCAAGTACTGGTGGT TGCGATGGGCGGTACTGGCCATCGTCGCAATCGTGCTTGCTATAGAGGTGGCGTTGGGCTGGGACCAGCTCGCCAAGGCC TGGGTGAGCTTGTATCGCGCCAAGTGGTGGTGGTTGCTGGCCGCGGTGGCAGCCGCGGGCGCCTCGATGCACAGCTTCGC CCAGATTCAGCGAACCCTGCTGAAATCCGCCGGGGTGCACGTCAAGCAATGGCGGTCGGAGGCCGCCTTCTACGCCGCCA ACTCGCTGAGCACCACGCTGCCGGGTGGGCCGGTGTTGTCGGCTACGTTCTTACTCCGTCAGCAACGCATCTGGGGCGCC TCGACGGTGGTGGCGTCATGGCAGCTGGTCATGTCGGGCGTGTTGCAGGCGGTGGGCTTGGCATTGCTCGGGTTGGGTGG CGCATTCTTCCTGGGCGCCAAGAACAACCCGTTCTCACTGCTGTTCACCCTGGGCGGCTTCGTCACATTGCTGCTACTGG CCCAGGCGGTGGCGTCGCGGCCGGAGCTCATCGAGGGGATCGGCAGGAGAGTTTTGTCGTGGGCCAACTCGGTTCGCGGT AGGCCGGCCGATGCCGGCCTACCGAAGTGGCGCGAGACGCTCATGCAGCTGGAATCGGTCAGCCTGGGCAGGCGCGACCT GGGCGTGGCGTTCGGTTGGTCGTTGTTCAACTGGATCGCCGACGTAGCCTGCCTCGGTTTCGCCGCGTACGCCGCCGGCG ACCATGCCTCGGTCGGTGGGCTGGCGGTCGCCTACGCCGCCGCCCGCGCGGTCGGCACCATACCGCTGATGCCCGGTGGT CTGTTGGTGGTCGAGGCGGTGCTGGTACCCGGCCTGGTATCCAGCGGCATGCCCTTGCCGAGTGCCATCTCGGCGATGTT GATCTACCGGCTGATCAGCTGGCTGCTCATCGCCGCAATCGGCTGGGTGGTGTTCTTCTTCATGTTCCGCACCGAGAGCA CCGCCGATTCCGACAACGATCGCGACCCGCCAACCGATCCAAACCTGCGACTTGTCATCCAACCGCAGGGCACACCCTGC GACGACCCGGTCGAAACCACACCGCAAGGTCCAGCGCCGACCCCTGACCTGCGACCAGAAGGCGGCGAGACACCGCCCCG GTAG
Upstream 100 bases:
>100_bases GCGTCGTAAGGTCGCGGCGGGTCGCGTCGAGCCCGCATAGTTACTTTGCCAGGCGGCACGATCCGGTCACGACCCCCCAA CGAGGCTGACACGGTTAGCG
Downstream 100 bases:
>100_bases GCGACCGCTGCCTCACGCTCGACTGCGCCGGACCCGGCGGCGGTCCGGCATCTACCGGCGGGCGCCCTGCACCGCCTGCA TCAAACCGATCGCCTGCAGG
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPCGKYWWLRWAVLAIVAIVLAIEVALGWDQLAKA WVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVHVKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGA STVVASWQLVMSGVLQAVGLALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGGLAVAYAAARAVGTIPLMPGG LLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAIGWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPC DDPVETTPQGPAPTPDLRPEGGETPPR
Sequences:
>Translated_427_residues MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPCGKYWWLRWAVLAIVAIVLAIEVALGWDQLAKA WVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVHVKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGA STVVASWQLVMSGVLQAVGLALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGGLAVAYAAARAVGTIPLMPGG LLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAIGWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPC DDPVETTPQGPAPTPDLRPEGGETPPR >Mature_427_residues MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPCGKYWWLRWAVLAIVAIVLAIEVALGWDQLAKA WVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVHVKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGA STVVASWQLVMSGVLQAVGLALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGGLAVAYAAARAVGTIPLMPGG LLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAIGWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPC DDPVETTPQGPAPTPDLRPEGGETPPR
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45693; Mature: 45693
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPCGKYWWLRWAVLA CCCCCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH IVAIVLAIEVALGWDQLAKAWVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH VKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGASTVVASWQLVMSGVLQAVGL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPCDDPVETTPQGPAPTPDLRPE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GGETPPR CCCCCCC >Mature Secondary Structure MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPCGKYWWLRWAVLA CCCCCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH IVAIVLAIEVALGWDQLAKAWVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH VKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGASTVVASWQLVMSGVLQAVGL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPCDDPVETTPQGPAPTPDLRPE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GGETPPR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA