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The map label for this gene is 148821229

Identifier: 148821229

GI number: 148821229

Start: 42105

End: 42452

Strand: Reverse

Name: 148821229

Synonym: TBFG_10038

Alternate gene names: NA

Gene position: 42452-42105 (Counterclockwise)

Preceding gene: 148821230

Following gene: 148821227

Centisome position: 0.96

GC content: 71.84

Gene sequence:

>348_bases
ATGTTCCTCGCGGGTGTGCTGTGCATGTGTGCGGCGGCGGCGTCCGCCCTGTTCGGGAGCTGGTCGCTGTGCCATACGCC
CACTGCCGACCCCACGGCGCTGGCGCTGCGCGCGATGGCGCCCACGCAGTTGGCAGCCGCAGTAATGCTGGCCGCCGGGG
GAGTGGTGGCGGTGGCCGCGCCCGGGCACACCGCCTTGATGGTGGTGATCGTCTGCATTGCGGGCGCGGTCGGCACGCTG
GCCGCGGGGTCGTGGCAGAGCGCCCAGTACGCGCTGCGCCGTGAAACCGCTAGCCCCACCGCCAACTGCGTTGGCAGCTG
CGCGGTCTGCACCCAGGCCTGTCATTGA

Upstream 100 bases:

>100_bases
ACCAGTCCCGCCGCGCTAGGTCGCGATGAGGCCGAGCAGAAACACGGGCCCGCATGGAGCTCGGTGAGCGGATTCGTCGG
CGGCCTCGTATGGTGAACGA

Downstream 100 bases:

>100_bases
ACAGCCTGTGGCCCACTAGGCTGGGCCGGATCGCCTGGCTCGACCGCGGCGACGCGACGCGCTGCTCTGGCAAGCTCGGC
GGCGGAGTAGCCTAGTTCCG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTL
AAGSWQSAQYALRRETASPTANCVGSCAVCTQACH

Sequences:

>Translated_115_residues
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTL
AAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
>Mature_115_residues
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTL
AAGSWQSAQYALRRETASPTANCVGSCAVCTQACH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0030

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y039_MYCTU (P71696)

Other databases:

- EMBL:   BX842572
- EMBL:   AE000516
- PIR:   E70702
- RefSeq:   NP_214553.1
- RefSeq:   NP_334453.1
- EnsemblBacteria:   EBMYCT00000002680
- EnsemblBacteria:   EBMYCT00000072453
- GeneID:   887038
- GeneID:   922636
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0044
- KEGG:   mtu:Rv0039c
- TIGR:   MT0044
- TubercuList:   Rv0039c
- GeneTree:   EBGT00050000015533
- HOGENOM:   HBG568446
- OMA:   IPDEASC
- ProtClustDB:   CLSK790215

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11292; Mature: 11292

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1486a24c)-; HASH(0x1691b444)-; HASH(0x169d45a8)-;

Cys/Met content:

7.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEC
PGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEC
PGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036