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The map label for this gene is ygeR [C]

Identifier: 148663654

GI number: 148663654

Start: 4240820

End: 4242043

Strand: Reverse

Name: ygeR [C]

Synonym: MRA_3826

Alternate gene names: 148663654

Gene position: 4242043-4240820 (Counterclockwise)

Preceding gene: 148663655

Following gene: 148663646

Centisome position: 95.97

GC content: 65.36

Gene sequence:

>1224_bases
ATGCGGATTCTGGCGATGACGCGTGCGCACAACGCCGGGCGGACACTAGCCGCAACGTTGGACTCGTTGGCCGTGTTCAG
CGACGACATCTACGTGATCGACGACCGCAGCACCGATGACACCGCCGAGATCCTGGCGAACCATCCTGCGGTGACGAACG
TGGTGCGGGCCCGACCAGATCTGCCGCCCACGCCATGGCTGATTCCTGAGTCCGCCGGGCTGGAACTGCTGTATCGGATG
GCGGACTTCTGCCGCCCGGACTGGGTGATGATGGTCGATGCCGATTGGTTGGTCGAGACCGACATCGATCTTCGGGCGGT
GTTAGCCCGCACACCGGACGACATCGTGGCGCTGATGTGTCCGATGGTGTCACGCTGGGATGATCCGGAGTATCCCGACC
TGATTCCGGTGATGGGAACCGCCGAAGCGCTACGTGGACCGTTGTGGCGCTGGTACCCGGGTCTGCGGGCAGGCGGCAAG
CTGATGCACAACCCGCATTGGCCGGCCAACATCACCGATCACGGTCGCATCGGACAGCTTCCGGGGGTTCGGCTGGTGCA
TAGCGGCTGGTCGACGCTGGCGGAACGGATCTTGAGGGTGGAGCACTATCTGCGGCTCGATCCGGACTATCGGTTCAACT
TCGGGGTGGCCTACGACCGATCTTTGTTGTTTGGCTACGCACTCGACGAGGTCGACCTGCTCAAAGCCGACTACCGGCGG
CGCATCCGCGGCGACTTCGATCCGCTCGAGCCGGGCGGGCGGCTGCCGATCGACCGGGAGCCGCGCGCGATCGGCCGCGG
GTACGGTCCGCACGCGGGTGGTTTCCATCCCGGTGTCGACTTCGCCACCGATCCGGGAACACCCGTCTACGCGGTCGCTT
CCGGGGCCGTCAGCGCGATCGACGAGGTCGATGGCCTGGTGTCGCTGACGATCGCACGCTGCGAGCTCGACGTTGTCTAT
GTATTTCGGCCCGGGGACGAGGGCCGCCTTGTCCTTGGTGATCGAATCGCCGCGGGAGCGCAACTGGGCACCATCGGTGC
GCAAGGCGAATCGGCAGATGGTTATCTGCATTTCGAGGTCCGCACGCAGGACGGGCATGTCAATCCGGTGCGGTACCTAG
CCAACATGGGACTACGGCCGTGGCCGCCACCGGGACGGTTGCGAGCCGTATCGGGCAGCTACCCGCCGGCCACGCCATGC
ACCATCACCGCCGAGGATCGGTAG

Upstream 100 bases:

>100_bases
GCTGGCCGCCCACGATCTGCCCGCGGCGCCCGCCCTTCCCGCTGGATTGGCGGACAGACCCAACTACTGGACCTGTGTTC
TGGGGTGATAGAGAGGCGGC

Downstream 100 bases:

>100_bases
CCATGCGCTCGCCGGCCTCGATCCGTTCCAGCAGGGCTCGGGCCGCTCGGATCGTCGAGCGGACCTCCTGCAGCAGCTTG
GCAGGGTGTTGTTGGTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRILAMTRAHNAGRTLAATLDSLAVFSDDIYVIDDRSTDDTAEILANHPAVTNVVRARPDLPPTPWLIPESAGLELLYRM
ADFCRPDWVMMVDADWLVETDIDLRAVLARTPDDIVALMCPMVSRWDDPEYPDLIPVMGTAEALRGPLWRWYPGLRAGGK
LMHNPHWPANITDHGRIGQLPGVRLVHSGWSTLAERILRVEHYLRLDPDYRFNFGVAYDRSLLFGYALDEVDLLKADYRR
RIRGDFDPLEPGGRLPIDREPRAIGRGYGPHAGGFHPGVDFATDPGTPVYAVASGAVSAIDEVDGLVSLTIARCELDVVY
VFRPGDEGRLVLGDRIAAGAQLGTIGAQGESADGYLHFEVRTQDGHVNPVRYLANMGLRPWPPPGRLRAVSGSYPPATPC
TITAEDR

Sequences:

>Translated_407_residues
MRILAMTRAHNAGRTLAATLDSLAVFSDDIYVIDDRSTDDTAEILANHPAVTNVVRARPDLPPTPWLIPESAGLELLYRM
ADFCRPDWVMMVDADWLVETDIDLRAVLARTPDDIVALMCPMVSRWDDPEYPDLIPVMGTAEALRGPLWRWYPGLRAGGK
LMHNPHWPANITDHGRIGQLPGVRLVHSGWSTLAERILRVEHYLRLDPDYRFNFGVAYDRSLLFGYALDEVDLLKADYRR
RIRGDFDPLEPGGRLPIDREPRAIGRGYGPHAGGFHPGVDFATDPGTPVYAVASGAVSAIDEVDGLVSLTIARCELDVVY
VFRPGDEGRLVLGDRIAAGAQLGTIGAQGESADGYLHFEVRTQDGHVNPVRYLANMGLRPWPPPGRLRAVSGSYPPATPC
TITAEDR
>Mature_407_residues
MRILAMTRAHNAGRTLAATLDSLAVFSDDIYVIDDRSTDDTAEILANHPAVTNVVRARPDLPPTPWLIPESAGLELLYRM
ADFCRPDWVMMVDADWLVETDIDLRAVLARTPDDIVALMCPMVSRWDDPEYPDLIPVMGTAEALRGPLWRWYPGLRAGGK
LMHNPHWPANITDHGRIGQLPGVRLVHSGWSTLAERILRVEHYLRLDPDYRFNFGVAYDRSLLFGYALDEVDLLKADYRR
RIRGDFDPLEPGGRLPIDREPRAIGRGYGPHAGGFHPGVDFATDPGTPVYAVASGAVSAIDEVDGLVSLTIARCELDVVY
VFRPGDEGRLVLGDRIAAGAQLGTIGAQGESADGYLHFEVRTQDGHVNPVRYLANMGLRPWPPPGRLRAVSGSYPPATPC
TITAEDR

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3786_MYCTU (P0A5H1)

Other databases:

- EMBL:   BX842584
- EMBL:   AE000516
- PIR:   F70696
- RefSeq:   NP_218303.1
- RefSeq:   NP_338445.1
- ProteinModelPortal:   P0A5H1
- EnsemblBacteria:   EBMYCT00000001558
- EnsemblBacteria:   EBMYCT00000070268
- GeneID:   886108
- GeneID:   922607
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT3894
- KEGG:   mtu:Rv3786c
- TIGR:   MT3894
- TubercuList:   Rv3786c
- GeneTree:   EBGT00050000015119
- HOGENOM:   HBG569783
- OMA:   VERNGMS
- ProtClustDB:   CLSK792722
- GO:   GO:0006508
- InterPro:   IPR011055
- InterPro:   IPR001173
- InterPro:   IPR016047
- InterPro:   IPR002886
- PANTHER:   PTHR21666:SF7

Pfam domain/function: PF00535 Glycos_transf_2; PF01551 Peptidase_M23; SSF51261 Dup_hybrid_motif

EC number: NA

Molecular weight: Translated: 44945; Mature: 44945

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILAMTRAHNAGRTLAATLDSLAVFSDDIYVIDDRSTDDTAEILANHPAVTNVVRARPD
CEEEEEECCCCCCCCHHHHHHHHHEECCCEEEEECCCCCHHHHHHHCCCHHHHHHHCCCC
LPPTPWLIPESAGLELLYRMADFCRPDWVMMVDADWLVETDIDLRAVLARTPDDIVALMC
CCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHCCCHHHHHHHH
PMVSRWDDPEYPDLIPVMGTAEALRGPLWRWYPGLRAGGKLMHNPHWPANITDHGRIGQL
HHHHCCCCCCCCCEEECCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGVRLVHSGWSTLAERILRVEHYLRLDPDYRFNFGVAYDRSLLFGYALDEVDLLKADYRR
CCCEEECCCHHHHHHHHHHHHHHEECCCCCEEEECEEECCCEEEEECCCHHHHHHHHHHH
RIRGDFDPLEPGGRLPIDREPRAIGRGYGPHAGGFHPGVDFATDPGTPVYAVASGAVSAI
HHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
DEVDGLVSLTIARCELDVVYVFRPGDEGRLVLGDRIAAGAQLGTIGAQGESADGYLHFEV
HHHCCCEEEEEEEEEEEEEEEEECCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEE
RTQDGHVNPVRYLANMGLRPWPPPGRLRAVSGSYPPATPCTITAEDR
ECCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEECCC
>Mature Secondary Structure
MRILAMTRAHNAGRTLAATLDSLAVFSDDIYVIDDRSTDDTAEILANHPAVTNVVRARPD
CEEEEEECCCCCCCCHHHHHHHHHEECCCEEEEECCCCCHHHHHHHCCCHHHHHHHCCCC
LPPTPWLIPESAGLELLYRMADFCRPDWVMMVDADWLVETDIDLRAVLARTPDDIVALMC
CCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHCCCHHHHHHHH
PMVSRWDDPEYPDLIPVMGTAEALRGPLWRWYPGLRAGGKLMHNPHWPANITDHGRIGQL
HHHHCCCCCCCCCEEECCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGVRLVHSGWSTLAERILRVEHYLRLDPDYRFNFGVAYDRSLLFGYALDEVDLLKADYRR
CCCEEECCCHHHHHHHHHHHHHHEECCCCCEEEECEEECCCEEEEECCCHHHHHHHHHHH
RIRGDFDPLEPGGRLPIDREPRAIGRGYGPHAGGFHPGVDFATDPGTPVYAVASGAVSAI
HHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
DEVDGLVSLTIARCELDVVYVFRPGDEGRLVLGDRIAAGAQLGTIGAQGESADGYLHFEV
HHHCCCEEEEEEEEEEEEEEEEECCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEE
RTQDGHVNPVRYLANMGLRPWPPPGRLRAVSGSYPPATPCTITAEDR
ECCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036