| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148663291
Identifier: 148663291
GI number: 148663291
Start: 3852563
End: 3853318
Strand: Reverse
Name: 148663291
Synonym: MRA_3467
Alternate gene names: NA
Gene position: 3853318-3852563 (Counterclockwise)
Preceding gene: 148663292
Following gene: 148663288
Centisome position: 87.18
GC content: 64.15
Gene sequence:
>756_bases ATGTCTATCTGTGATCCGGCGCTGCGTAATGCGCTACGTACCCTGAAACTGTCCGGCATGCTCGACACCCTCGACGCCCG CCTGGCCCAAACCCGCAACGGCGACCTGGGGCATCTGGAATTCCTGCAAGCGTTGCGTGAAGACGAGATCGCCCGCCGCG AGTCCGCCGCCCTGACACGACGATTACGCCGCGCCAAGTTCGAAGCCCAAGCCACCTTCGAAGACTTCGACTTCACTGCC AACCCGAAACTGCCCGGTGCGATGTTGCGCGATCTGGCCGCGCTGCGCTGGCTGGATGCCGGCGAATCGGTCATCCTCCA CGGCCCGGTCGGCGTCGGAAAAACCCATGTAGCACAAGCACTTGTCCACGCCGTGGCCCGCCGCGGCGGCGACGTGCGCT TCGCCAAAACCTCCCGCATGCTCTCCGACCTCGCCGGCGGGCACGCCGACCGATCCTGGGGCCAACGCATCCGCGAATAC ACCAAGCCGCTCGTGCTCATTCTGGACGACTTCGCGATGCGTGAGCACACCGCCATGCACGCTGATGACCTCTACGAGCT CATCAGCGACCGCGCCATCACTGGCAAACCGCTGATCTTGACCAGCAACCGCGCACCGAATAACTGGTACGGCCTGTTCC CCAACCCCGTCGTCGCCGAATCACTCCTGGATCGGCTCATCAACACCAGCCACCAAATCCTCATGGACGGACCCAGCTAC CGACCCCGCAAGAGACCCGGCCGCACCACCAGCTAG
Upstream 100 bases:
>100_bases TGAACAGTTCGGCACCGACACACCCCGTCGCCTGATCTCACAGCGGAATCCCGAACCATCCCGACACAATCCACATCGCT ATTCTCAAGGAGAAGCATCC
Downstream 100 bases:
>100_bases ACAACGCCCACACGGGCCGCTAAGACCTACCACTGAGGCACACACCTGGGGAATTACGTGACGCCAACCCCTGGGGAATT ACGTGGCGGTCGACAGGGGC
Product: ISMt2 transposase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTA NPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREY TKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY RPRKRPGRTTS
Sequences:
>Translated_251_residues MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTA NPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREY TKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY RPRKRPGRTTS >Mature_250_residues SICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTAN PKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYT KPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR PRKRPGRTTS
Specific function: Unknown
COG id: COG1484
COG function: function code L; DNA replication protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3427_MYCTU (Q50701)
Other databases:
- EMBL: BX842583 - PIR: H70738 - RefSeq: NP_217944.1 - ProteinModelPortal: Q50701 - EnsemblBacteria: EBMYCT00000002045 - GeneID: 887631 - GenomeReviews: AL123456_GR - KEGG: mtu:Rv3427c - TubercuList: Rv3427c - GeneTree: EBGT00050000015135 - HOGENOM: HBG695266 - OMA: FVERHEN - ProtClustDB: CLSK792485 - GO: GO:0040007 - InterPro: IPR003593 - InterPro: IPR002611 - SMART: SM00382
Pfam domain/function: PF01695 IstB
EC number: NA
Molecular weight: Translated: 28028; Mature: 27897
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH HHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC RPRKRPGRTTS CCCCCCCCCCC >Mature Secondary Structure SICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH HHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC RPRKRPGRTTS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230