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The map label for this gene is sdhC

Identifier: 148663180

GI number: 148663180

Start: 3714943

End: 3715281

Strand: Direct

Name: sdhC

Synonym: MRA_3358

Alternate gene names: NA

Gene position: 3714943-3715281 (Clockwise)

Preceding gene: 148663174

Following gene: 148663181

Centisome position: 84.05

GC content: 59.88

Gene sequence:

>339_bases
ATGTGGTCGTGGGTATGCCATCGCATCAGCGGCGCGACGATTTTCTTCTTCCTGTTTGTCCATGTCCTGGACGCCGCCAT
GCTGCGGGTGAGCCCGCAGACCTACAACGCGGTGCTGGCGACCTACAAGACCCCGATCGTCGGCCTGATGGAGTACGGCC
TAGTCGCCGCGGTCCTTTTTCACGCACTGAACGGGATTCGGGTCATCTTGATCGATTTCTGGTCGGAAGGCCCGCGCTAT
CAGCGGCTGATGTTGTGGATCATCGGCAGCGTCTTCCTCTTGCTGATGGTTCCGGCAGGCGTGGTGGTGGGCATCCACAT
GTGGGAGCACTTCCGATGA

Upstream 100 bases:

>100_bases
GATAGTGCTTTTAAGGGGTTTGCCAGCGGTGAATACAACGGCGACAACCGTCTCGCGCGGGCGGCGGCCACCTCGGACCC
TGTATCGGGGAGATCCCGGT

Downstream 100 bases:

>100_bases
GCGCCCCGGTCAGACAGCGCAGCCATGACCGTCCAGCCAGCCTGGACAACCCACGATCACCACGGCGGCGTGCCGGCATG
CCCAACTTCGAGAAATTCGC

Product: succinate dehydrogenase cytochrome B-556 subunit SdhC

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Cytochrome B Subunit; Succinate Dehydrogenase Membrane Subunit; Succinate Dehydrogenase Subunit C; Succinate Dehydrogenase Cytochrome Subunit; Succinate Dehydrogenase SdhC; Succinate Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLFHALNGIRVILIDFWSEGPRY
QRLMLWIIGSVFLLLMVPAGVVVGIHMWEHFR

Sequences:

>Translated_112_residues
MWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLFHALNGIRVILIDFWSEGPRY
QRLMLWIIGSVFLLLMVPAGVVVGIHMWEHFR
>Mature_112_residues
MWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLFHALNGIRVILIDFWSEGPRY
QRLMLWIIGSVFLLLMVPAGVVVGIHMWEHFR

Specific function: Unknown

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 12838; Mature: 12838

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLF
CCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
HALNGIRVILIDFWSEGPRYQRLMLWIIGSVFLLLMVPAGVVVGIHMWEHFR
HHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLF
CCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
HALNGIRVILIDFWSEGPRYQRLMLWIIGSVFLLLMVPAGVVVGIHMWEHFR
HHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA