Click here to switch to the map view.

The map label for this gene is embR [H]

Identifier: 148662978

GI number: 148662978

Start: 3501662

End: 3502531

Strand: Direct

Name: embR [H]

Synonym: MRA_3156

Alternate gene names: 148662978

Gene position: 3501662-3502531 (Clockwise)

Preceding gene: 148662977

Following gene: 148662981

Centisome position: 79.22

GC content: 56.32

Gene sequence:

>870_bases
GTGCAATTCAACGTCTTAGGACCACTGGAACTAAACCTCCGGGGCACCAAACTGCCATTGGGAACGCCGAAACAACGTGC
CGTGCTCGCCATGCTGTTGCTATCCCGGAACCAAGTCGTAGCGGCCGACGCACTGGTCCAGGCAATCTGGGAGAAGTCGC
CACCTGCACGAGCCCGACGCACCGTCCACACGTACATTTGCAACCTTCGCCGGACCCTGAGCGATGCAGGCGTTGATTCG
CGCAACATCTTGGTTAGTGAGCCGCCGGGCTATCGCCTTCTCATTGGAGATCGACAGCAATGCGATCTCGACCGTTTCGT
GGCAGCGAAAGAATCGGGACTGCGCGCTTCTGCCAAAGGATATTTTAGCGAGGCGATCCGTTATCTAGATTCGGCCTTGC
AGAATTGGCGCGGTCCAGTACTGGGGGACCTACGCAGCTTTATGTTTGTCCAAATGTTCAGCAGGGCGTTGACCGAAGAT
GAGCTCCTCGTCCATACGAAGCTGGCCGAAGCTGCAATCGCCTGCGGACGCGCCGACGTCGTTATCCCTAAATTGGAAAG
ACTCGTTGCGATGCATCCTTATCGCGAGTCGTTATGGAAGCAGTTAATGCTCGGCTACTACGTGAACGAATACCAGTCCG
CGGCAATCGACGCATATCATAGACTCAAGTCCACGCTCGCAGAGGAACTCGGTGTTGAGCCGGCACCCACGATACGTGCG
CTCTACCACAAAATTCTTCGCCAATTGCCCATGGACGATCTCGTCGGCCGAGTCACGCGTGGCAGGGTTGACTTGCGTGG
CGGCAACGGCGCTAAGGTAGAGGAACTGACCGAGAGCGATAAGGATCTCCTTCCCATCGGTTTGGCATAA

Upstream 100 bases:

>100_bases
CGGCCCCCGGCACCGGACAAGCCGGCGGGATCTTGTGGGGCAACGGCCGTTTTCGCCCAATCACAGGAGTGGAGTTTTGA
ACGCAACGACGGCAGGTGCT

Downstream 100 bases:

>100_bases
CTACGCCCCTCAATGCAAGCGAGCTGATTCGATGTTGTCGAGCCGGAGCCCGCTCCGACCTCCGTCACACAGACCGGACT
ACGAATACTGACCCGCGCTG

Product: putative transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQFNVLGPLELNLRGTKLPLGTPKQRAVLAMLLLSRNQVVAADALVQAIWEKSPPARARRTVHTYICNLRRTLSDAGVDS
RNILVSEPPGYRLLIGDRQQCDLDRFVAAKESGLRASAKGYFSEAIRYLDSALQNWRGPVLGDLRSFMFVQMFSRALTED
ELLVHTKLAEAAIACGRADVVIPKLERLVAMHPYRESLWKQLMLGYYVNEYQSAAIDAYHRLKSTLAEELGVEPAPTIRA
LYHKILRQLPMDDLVGRVTRGRVDLRGGNGAKVEELTESDKDLLPIGLA

Sequences:

>Translated_289_residues
MQFNVLGPLELNLRGTKLPLGTPKQRAVLAMLLLSRNQVVAADALVQAIWEKSPPARARRTVHTYICNLRRTLSDAGVDS
RNILVSEPPGYRLLIGDRQQCDLDRFVAAKESGLRASAKGYFSEAIRYLDSALQNWRGPVLGDLRSFMFVQMFSRALTED
ELLVHTKLAEAAIACGRADVVIPKLERLVAMHPYRESLWKQLMLGYYVNEYQSAAIDAYHRLKSTLAEELGVEPAPTIRA
LYHKILRQLPMDDLVGRVTRGRVDLRGGNGAKVEELTESDKDLLPIGLA
>Mature_289_residues
MQFNVLGPLELNLRGTKLPLGTPKQRAVLAMLLLSRNQVVAADALVQAIWEKSPPARARRTVHTYICNLRRTLSDAGVDS
RNILVSEPPGYRLLIGDRQQCDLDRFVAAKESGLRASAKGYFSEAIRYLDSALQNWRGPVLGDLRSFMFVQMFSRALTED
ELLVHTKLAEAAIACGRADVVIPKLERLVAMHPYRESLWKQLMLGYYVNEYQSAAIDAYHRLKSTLAEELGVEPAPTIRA
LYHKILRQLPMDDLVGRVTRGRVDLRGGNGAKVEELTESDKDLLPIGLA

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR000253
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR008984
- InterPro:   IPR011990
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00498 FHA; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 32306; Mature: 32306

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFNVLGPLELNLRGTKLPLGTPKQRAVLAMLLLSRNQVVAADALVQAIWEKSPPARARR
CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
TVHTYICNLRRTLSDAGVDSRNILVSEPPGYRLLIGDRQQCDLDRFVAAKESGLRASAKG
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH
YFSEAIRYLDSALQNWRGPVLGDLRSFMFVQMFSRALTEDELLVHTKLAEAAIACGRADV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
VIPKLERLVAMHPYRESLWKQLMLGYYVNEYQSAAIDAYHRLKSTLAEELGVEPAPTIRA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LYHKILRQLPMDDLVGRVTRGRVDLRGGNGAKVEELTESDKDLLPIGLA
HHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQFNVLGPLELNLRGTKLPLGTPKQRAVLAMLLLSRNQVVAADALVQAIWEKSPPARARR
CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
TVHTYICNLRRTLSDAGVDSRNILVSEPPGYRLLIGDRQQCDLDRFVAAKESGLRASAKG
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH
YFSEAIRYLDSALQNWRGPVLGDLRSFMFVQMFSRALTEDELLVHTKLAEAAIACGRADV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
VIPKLERLVAMHPYRESLWKQLMLGYYVNEYQSAAIDAYHRLKSTLAEELGVEPAPTIRA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LYHKILRQLPMDDLVGRVTRGRVDLRGGNGAKVEELTESDKDLLPIGLA
HHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]