| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is yidJ [H]
Identifier: 148662931
GI number: 148662931
Start: 3451697
End: 3453508
Strand: Direct
Name: yidJ [H]
Synonym: MRA_3110
Alternate gene names: 148662931
Gene position: 3451697-3453508 (Clockwise)
Preceding gene: 148662930
Following gene: 148662932
Centisome position: 78.09
GC content: 67.38
Gene sequence:
>1812_bases ATGGCTAACCGTCCCGACATCATCATCGTGATGACCGACGAGGAACGTGCGGTGCCGCCGTACGAGTCGGCCGAGGTGCT CGCCTGGCGTCAACGCAGCTTGACCGGCCGCCGTTGGTTCGACGAGCACGGGATCAGTTTCACTCGGCACTACACCGGTT CGCTGGCGTGCGTGCCCAGCCGCCCGACGATTTTCACCGGCCAATATCCGGATCTGCACGGCGTCACCCAGACCGACGGC ATCGGCAAGCGATTCGATGATTCGCGGCTGCGCTGGCTACGGGCCGGCGAGGTGCCGACGTTGGGTAACTGGTTTCGCGC GGCCGGGTATGACACTCACTACGACGGCAAGTGGCACATCTCGCACGCCGATCTGGAAGACCCCGCGACCGGTGCACCAC TGGCCACCAACGACAACGAGGGCGTCGTCGACTCGGCCGCGGTGCGGCGTTACCTCGACGCCGACCCGCTCGGGCCATAC GGCTTCTCCGGGTGGGTGGGCCCCGAGCCCCATGGGGCGGGGTTGGCCAACAGCGGTTTTCGTCGCGACCCGCTGGTCGC CGATCGTGTCGTCGCGTGGCTGACCGAGCGCTACGCCCGGCGGCGCGCCGGTGACACCGCCGCGATGCGCCCGTTCTTGC TGGTGGCCAGCTTCGTCAACCCGCACGACATCGTGCTGTTCCCGGCATGGGTGTGGCGCAGCCCGCTAAAGCCCTCCCCA CTGGACCCGCCACACGTACCGGCGGCGCCGACCGCCGACGAGGACCTGTCGACCAAGCCGGCCGCGCAGGTCGCCTACCG GGAGGCGTACTACTCCGGATACGGCCTAACGCGTATGGTCAGCCGCAACTATGCCCGCAACGCGCAGCGCTACCGGGACC TCTACTACCGCCTGCACGCCGAGGTCGACGGGCCGATCGACCGTGTGGGCCGCGCGGTCACCGAGGGCGGATCCGAGGAT GCCATGCTGGTGCGCACCTCCGACCATGGCGATCTGCTCGGAGCGCATGGCGGACTGCACCAGAAGTGGTTCAACCTCTA TGACGAGGCAACCAGGGTGCCGTTCGTCATTGCCCGCATCGGCGAGAAGGCAACCCAACCGCGCACGGTCTCGGCGCCCA CCTCGCATGTCGACTTGGTGCCGACGCTGCTTAGCGCGGCCGGCGTGGACGTAGACGTGGTGGCCGCGGCCCTGGCCGAA TCGTTCTCCGAGGTGCATCCGCTGCCCGGTCGTGACCTGATGCCGGTCGTGGACGGGGCTTCGGCCGACGAGGGTCGGGC CATCTACCTGATGACGCGTGACAACGTGCTCGAAGGCGACACCGGCGCGTCCCTGCTGTCGCGGCAACTGGGCCGTATCG TGAATCCGCCTGCACCGCTGCGCATCAAGGTGCCCGCCCACGTCGCCGCCAACTTCGAGGGATTAGTCGTACGGGTCGAT GACACCGACGCCGCCGGTGGTGCCGGGCACCTGTGGAAACTGGTGCGTACCTTCGACGACCCGGCCACCTGGACCGAACC CGGTGTGCGTCACCTGGCCACCAACGGCATGGGCGGCGACGCCTATCGCACCGATCCACTGGACGACCAGTGGGAGCTCT ACGACCTGACCGCCGATCCCATCGAGGCATACAACCGGTGGACCGACCCACAACTGCACGAGCTGCGACAGCATCTGCGG ATGCTGCTCAAACAGCAACGTGCGGTATCGGTACCGGAACGCAACCAACCGTGGCCGTATGCTCATCGACTGCCGCCGAG CGGGGCATCCAACGGTTTGGTGCGGCGAGTGTTGGGAAGGTTCGTGCGCTAA
Upstream 100 bases:
>100_bases AACCCGCTGGCGCGTCTGGCCGAACTTGTCGTCGGCCGCGCCATGGCCAAGCGGTCCAACACGATGCTCGCCGGGCTGGC ACAACGATTGGAGGACAAAC
Downstream 100 bases:
>100_bases TTGCAGAAGCTGCTATTCACCATCGGGTTGGCCCTGTTCCTGATCGGCCTGCTTACCGGATTGGTCATCCCGGCACTGAA GAACCCGCGCATGGCGCTGT
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MANRPDIIIVMTDEERAVPPYESAEVLAWRQRSLTGRRWFDEHGISFTRHYTGSLACVPSRPTIFTGQYPDLHGVTQTDG IGKRFDDSRLRWLRAGEVPTLGNWFRAAGYDTHYDGKWHISHADLEDPATGAPLATNDNEGVVDSAAVRRYLDADPLGPY GFSGWVGPEPHGAGLANSGFRRDPLVADRVVAWLTERYARRRAGDTAAMRPFLLVASFVNPHDIVLFPAWVWRSPLKPSP LDPPHVPAAPTADEDLSTKPAAQVAYREAYYSGYGLTRMVSRNYARNAQRYRDLYYRLHAEVDGPIDRVGRAVTEGGSED AMLVRTSDHGDLLGAHGGLHQKWFNLYDEATRVPFVIARIGEKATQPRTVSAPTSHVDLVPTLLSAAGVDVDVVAAALAE SFSEVHPLPGRDLMPVVDGASADEGRAIYLMTRDNVLEGDTGASLLSRQLGRIVNPPAPLRIKVPAHVAANFEGLVVRVD DTDAAGGAGHLWKLVRTFDDPATWTEPGVRHLATNGMGGDAYRTDPLDDQWELYDLTADPIEAYNRWTDPQLHELRQHLR MLLKQQRAVSVPERNQPWPYAHRLPPSGASNGLVRRVLGRFVR
Sequences:
>Translated_603_residues MANRPDIIIVMTDEERAVPPYESAEVLAWRQRSLTGRRWFDEHGISFTRHYTGSLACVPSRPTIFTGQYPDLHGVTQTDG IGKRFDDSRLRWLRAGEVPTLGNWFRAAGYDTHYDGKWHISHADLEDPATGAPLATNDNEGVVDSAAVRRYLDADPLGPY GFSGWVGPEPHGAGLANSGFRRDPLVADRVVAWLTERYARRRAGDTAAMRPFLLVASFVNPHDIVLFPAWVWRSPLKPSP LDPPHVPAAPTADEDLSTKPAAQVAYREAYYSGYGLTRMVSRNYARNAQRYRDLYYRLHAEVDGPIDRVGRAVTEGGSED AMLVRTSDHGDLLGAHGGLHQKWFNLYDEATRVPFVIARIGEKATQPRTVSAPTSHVDLVPTLLSAAGVDVDVVAAALAE SFSEVHPLPGRDLMPVVDGASADEGRAIYLMTRDNVLEGDTGASLLSRQLGRIVNPPAPLRIKVPAHVAANFEGLVVRVD DTDAAGGAGHLWKLVRTFDDPATWTEPGVRHLATNGMGGDAYRTDPLDDQWELYDLTADPIEAYNRWTDPQLHELRQHLR MLLKQQRAVSVPERNQPWPYAHRLPPSGASNGLVRRVLGRFVR >Mature_602_residues ANRPDIIIVMTDEERAVPPYESAEVLAWRQRSLTGRRWFDEHGISFTRHYTGSLACVPSRPTIFTGQYPDLHGVTQTDGI GKRFDDSRLRWLRAGEVPTLGNWFRAAGYDTHYDGKWHISHADLEDPATGAPLATNDNEGVVDSAAVRRYLDADPLGPYG FSGWVGPEPHGAGLANSGFRRDPLVADRVVAWLTERYARRRAGDTAAMRPFLLVASFVNPHDIVLFPAWVWRSPLKPSPL DPPHVPAAPTADEDLSTKPAAQVAYREAYYSGYGLTRMVSRNYARNAQRYRDLYYRLHAEVDGPIDRVGRAVTEGGSEDA MLVRTSDHGDLLGAHGGLHQKWFNLYDEATRVPFVIARIGEKATQPRTVSAPTSHVDLVPTLLSAAGVDVDVVAAALAES FSEVHPLPGRDLMPVVDGASADEGRAIYLMTRDNVLEGDTGASLLSRQLGRIVNPPAPLRIKVPAHVAANFEGLVVRVDD TDAAGGAGHLWKLVRTFDDPATWTEPGVRHLATNGMGGDAYRTDPLDDQWELYDLTADPIEAYNRWTDPQLHELRQHLRM LLKQQRAVSVPERNQPWPYAHRLPPSGASNGLVRRVLGRFVR
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Escherichia coli, GI1790112, Length=391, Percent_Identity=28.1329923273657, Blast_Score=106, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: 3.1.6.- [C]
Molecular weight: Translated: 66742; Mature: 66610
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRPDIIIVMTDEERAVPPYESAEVLAWRQRSLTGRRWFDEHGISFTRHYTGSLACVPS CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCEEEEECCCEEEEECC RPTIFTGQYPDLHGVTQTDGIGKRFDDSRLRWLRAGEVPTLGNWFRAAGYDTHYDGKWHI CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCHHHHHCCCCCCCCCEEEE SHADLEDPATGAPLATNDNEGVVDSAAVRRYLDADPLGPYGFSGWVGPEPHGAGLANSGF ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC RRDPLVADRVVAWLTERYARRRAGDTAAMRPFLLVASFVNPHDIVLFPAWVWRSPLKPSP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCC LDPPHVPAAPTADEDLSTKPAAQVAYREAYYSGYGLTRMVSRNYARNAQRYRDLYYRLHA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EVDGPIDRVGRAVTEGGSEDAMLVRTSDHGDLLGAHGGLHQKWFNLYDEATRVPFVIARI CCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEHH GEKATQPRTVSAPTSHVDLVPTLLSAAGVDVDVVAAALAESFSEVHPLPGRDLMPVVDGA HHHHCCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCC SADEGRAIYLMTRDNVLEGDTGASLLSRQLGRIVNPPAPLRIKVPAHVAANFEGLVVRVD CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCEEEEEEC DTDAAGGAGHLWKLVRTFDDPATWTEPGVRHLATNGMGGDAYRTDPLDDQWELYDLTADP CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCH IEAYNRWTDPQLHELRQHLRMLLKQQRAVSVPERNQPWPYAHRLPPSGASNGLVRRVLGR HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH FVR HCC >Mature Secondary Structure ANRPDIIIVMTDEERAVPPYESAEVLAWRQRSLTGRRWFDEHGISFTRHYTGSLACVPS CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCEEEEECCCEEEEECC RPTIFTGQYPDLHGVTQTDGIGKRFDDSRLRWLRAGEVPTLGNWFRAAGYDTHYDGKWHI CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCHHHHHCCCCCCCCCEEEE SHADLEDPATGAPLATNDNEGVVDSAAVRRYLDADPLGPYGFSGWVGPEPHGAGLANSGF ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC RRDPLVADRVVAWLTERYARRRAGDTAAMRPFLLVASFVNPHDIVLFPAWVWRSPLKPSP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCC LDPPHVPAAPTADEDLSTKPAAQVAYREAYYSGYGLTRMVSRNYARNAQRYRDLYYRLHA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EVDGPIDRVGRAVTEGGSEDAMLVRTSDHGDLLGAHGGLHQKWFNLYDEATRVPFVIARI CCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEHH GEKATQPRTVSAPTSHVDLVPTLLSAAGVDVDVVAAALAESFSEVHPLPGRDLMPVVDGA HHHHCCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCC SADEGRAIYLMTRDNVLEGDTGASLLSRQLGRIVNPPAPLRIKVPAHVAANFEGLVVRVD CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCEEEEEEC DTDAAGGAGHLWKLVRTFDDPATWTEPGVRHLATNGMGGDAYRTDPLDDQWELYDLTADP CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCH IEAYNRWTDPQLHELRQHLRMLLKQQRAVSVPERNQPWPYAHRLPPSGASNGLVRRVLGR HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH FVR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]