Click here to switch to the map view.

The map label for this gene is pup [H]

Identifier: 148661926

GI number: 148661926

Start: 2380500

End: 2380694

Strand: Reverse

Name: pup [H]

Synonym: MRA_2126

Alternate gene names: 148661926

Gene position: 2380694-2380500 (Counterclockwise)

Preceding gene: 148661927

Following gene: 148661925

Centisome position: 53.86

GC content: 65.13

Gene sequence:

>195_bases
ATGGCGCAAGAGCAGACCAAGCGTGGCGGTGGCGGCGGCGATGATGACGACATCGCCGGCAGCACCGCCGCGGGCCAGGA
GCGTCGCGAAAAGCTGACCGAGGAGACCGACGATCTGCTCGACGAAATCGACGACGTCCTCGAGGAGAACGCCGAGGACT
TCGTCCGCGCATACGTCCAAAAGGGCGGACAGTGA

Upstream 100 bases:

>100_bases
CGGGAAACGTTGGTGTTGACCGGTAGGGTAGAGAAAGACAGCGGGCGTGTGACGCGCACCCGCGGCCTTTTGAAAGGCCA
TGAGGAAGCAGGAGGCGGCG

Downstream 100 bases:

>100_bases
CCTGGCCGTTGCCCGATCGCCTGTCCATTAATTCACTCTCTGGAACACCCGCTGTAGACCTATCTTCTTTCACTGACTTC
CTGCGCCGCCAGGCGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterial ubiquitin-like modifier [H]

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ

Sequences:

>Translated_64_residues
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ
>Mature_63_residues
AQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ

Specific function: Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic ubiquitin-like protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008515 [H]

Pfam domain/function: PF05639 DUF797 [H]

EC number: NA

Molecular weight: Translated: 6944; Mature: 6813

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KGGQ
HCCC
>Mature Secondary Structure 
AQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KGGQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA